FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003647233

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003647233
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences139
Sequences flagged as poor quality0
Sequence length146
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGTGGATGTGGATCGGAAAATTTTTGAACTTCCTTTTCGCCGTTTGCGG42.877697841726619No Hit
ATTGTGGAACGCGCCAAAAGATCAAACTCGGGAACGGCCTTTGCCCAGAA32.158273381294964No Hit
GGCAAACCACAGGCCAGGGCCTCAGCGTAAACGACACCGAACGTTTCAAA32.158273381294964No Hit
CGTTTGTAGCGGCCTTGTTATGTTTTGCTGTGCCGTCAAAAGGTGTTGCG32.158273381294964No Hit
CTGCTGGGCGATCGTGCGGCAGCAGGCGGCCACTTTTGGTCGGAACTGGA32.158273381294964No Hit
GTATTAATCACAAAAGCCTCTTTTTTCATGAACGCAAACTGTTTTTCGCC32.158273381294964No Hit
ATATATCCCAGGAAGCGCAAAAACGGGTAGCTCTGGCGTTGGCTCTGGCC32.158273381294964No Hit
TCATATGCATTAATTACCGGGGCTAGCGGAGGCATCGGTGTGAAACTTGC32.158273381294964No Hit
TCCACAACCCGGTGAATAATCCGTTTTGGATAACCAAACCGCTTCTGAAC21.4388489208633095No Hit
GTTCATTTCCAAAAAATAAAAATTCCCTTTTTCGTCGACAACAAATTCTA21.4388489208633095No Hit
ATGCAACGGTGAATGAAGCTGGAATACGTCGTCTTGTCGTGTTTCGACAT21.4388489208633095No Hit
GGTTTTAAATAAGGAATCCCAAATGACCGCAACCCGCTCATATGTGCGAT21.4388489208633095No Hit
CGCAAATTCGGCCTCCTCCGCACCGCTAACGGGTGATAAGAAACGACTGT21.4388489208633095No Hit
GTGAGAGGAGCTTCGACATGAATGGGTCGCCTTCTCTTGAAGGAATTCAA21.4388489208633095No Hit
GTGTTAATATTAGTCACAAAGTCGACTTCCCCCTGAAAATTTGATTCCTT21.4388489208633095No Hit
GTCAAATGGTTTCAGGAGCTTGCTCTTCCGGAAAAGTCACCGCAAGCGTT21.4388489208633095No Hit
GCCCACGTGTTACTCACCCGTCCGCCGCTCGGTCCGCTCACTTCCTCCCG21.4388489208633095No Hit
CCCTATTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAAT21.4388489208633095No Hit
GGCACGTATGAACCGGGCTGACCGGTAAATTGTTCGGCAACGTGAAAGTT21.4388489208633095No Hit
GAAACAGCGTGTTGCCATTGCTCGGGCGCTGTTACAAAATCCACGAGTGT21.4388489208633095No Hit
CATTTTCTGCTTTTCCGTATTCTTCCTCAAGCAACGACTCCATCGCTTCT21.4388489208633095No Hit
GCTGTATACCGACAAAAGCTCTTTTAAGAAGTGCAGAAGTGTATGCGACT21.4388489208633095No Hit
GTTCAGCATGTAAAATAATAAAAGACAGATTCATGGCGTGCCAATTTCGG21.4388489208633095No Hit
GCGCCTCACTGTCCCAGTACGGCGTACCGAGCCCGACAAAAGCCGGCACG21.4388489208633095No Hit
GTATATACATGTTTGTCAACCGAATCGCCTAAGTAAAAATTTCCTTGCCG21.4388489208633095No Hit
GTCACCAAAACAGTGTGGTACTGATATAAAAATGGGCACATAGACCAATG21.4388489208633095No Hit
ACTGACGCTTTGGCTTCACCGTTTCCTTTAAAGGGTAATCTTTCCCTTTG21.4388489208633095No Hit
GACAAAGATGACGAAAAACAATAAATGGAATCTATTCCCTGCACCGCTAA21.4388489208633095No Hit
TTTGCGGAACCGTTGACGGTAGATGAGATTAAAGAGATATTTCGCATGAC21.4388489208633095No Hit
CTACAGGCACGCGTACCGTTTCATACATGGCATGAATGATAGCGGGCAAT21.4388489208633095No Hit
GGGCTTCACCCATCTTTCCTTGGAAGAGTTCCGTCAGGAATTCTGCTTCC21.4388489208633095No Hit
ATTCTATTTTTATTGTGAGCATAATCATCCATTCTCGCAAGCCCAGTGAC10.7194244604316548No Hit
GTTATATAATTGGCGTTTGAACAACGCGCGCTGCAGGGTCTGAGTCACAT10.7194244604316548No Hit
CATATCAACTCCATCATGCCTCCGCCAGCGGGAAATGACAGCTTCCGGCG10.7194244604316548No Hit
GAGTCCCTTCGAGTGAAATTTTACACATACTAAGCTCCTGAAGACAACGG10.7194244604316548No Hit
CGTCTTCTCGAAGCCCAACGGGCGGAGGCTGAAGAACATCTTGAGGATAT10.7194244604316548No Hit
GTATAGCTCGATTTTCCTGATGCACAATACAAGTGGATTGACAAATACGG10.7194244604316548No Hit
CTTACAACATTTTCAGAAACACGAAGCGCTTAAACAAGTTGAAGAAAAAA10.7194244604316548No Hit
CTTGGTTATTTGGCCCGACAGTGCAAAAATTGGAAAGGGCGCTTGATCGC10.7194244604316548No Hit
GAATACAATGGAATGGAATCAACCCGAGTGCAATCGAATGGAATCGAATG10.7194244604316548No Hit
CTGTAAGTTTTGCTTCTGCACTAGCCATTAGAGCAGCTGTTGTTTCGTGC10.7194244604316548No Hit
CTACTGCGACTGCAGCACGGTTTGCCCCTCGCCGTGCAGCGATTCGATGG10.7194244604316548No Hit
GCAATAATGTTTGCATTCAGCCAGCATTTCTTCTAACAATTCGTAAAAAC10.7194244604316548No Hit
GTGCGGACGAAAAACGGAGATGAGCCGTCTATTTCTGGAAAAGAACAGCA10.7194244604316548No Hit
TTTGAGGAGTGAGTGCATGATTTACGGTGCCATAGAAGCCGGGGGCACGA10.7194244604316548No Hit
ACCAATAAAGAGACCGCACGCTTCCTCCTGGATCAAACGTTAACGAAGTG10.7194244604316548No Hit
GCCAAGCACCATCTTGAACAAGCCGGATATTCTGATCGCGTCACTTATAT10.7194244604316548No Hit
ATTGACAACTTGCCTCCAACGTTATTGCCCAAATTTAGCGAATTAATGCA10.7194244604316548No Hit
AAACTGCGCCGAGCCGGGATTGCCGTCGAAGTGGGCCTGCTGGCTGAAGA10.7194244604316548No Hit
AAGGTGCCGAACGAGCACATCGACTTTTGCTGCGGCTCGGGGAGGACCGT10.7194244604316548No Hit
GTCATACCTCCGATGCTTGAATCGTTTTGCCGGCCAGAAAGCAAAGCGTC10.7194244604316548No Hit
CATTGGAACAAGGCTCATCGACTCCGCCCCGCCGGCAATCACTGCTTCAC10.7194244604316548No Hit
GTCCTGGATCAGAGCCAAAGGATTTTACCACTCATAGAACAGCAAGCAGC10.7194244604316548No Hit
TGTTCAAGCAGCGGCAGAAAGTTACGTCGGTCTTGTTGAAGTCGGTGTCG10.7194244604316548No Hit
GGCCGGAATCAAGCCGAAACGTAAACGACGTCCACCGAAGGTGCATCGCC10.7194244604316548No Hit
GCTTGATGAAGTGCTCGTTGGACCGACGGCGGTCGCTTTTAGTGAAGATG10.7194244604316548No Hit
GTGAGAGGAGATGCGCAATGAAGGGGTCTCCTACTCGTGAAGGAATTCAA10.7194244604316548No Hit
GTGTACATGTAACATTTAATATGTAAACCTAAGCACATTTGGGTGAAACT10.7194244604316548No Hit
ATTGTAGTAAGTGTCAACGTCGTATGGTTTCAGGCGAAATTTATTAATCT10.7194244604316548No Hit
CCGATTTCCAGTGAAATTTGAATTTTTTACGTGAAAACACGAGAGTCTTG10.7194244604316548No Hit
GTGACGGACCGGTGGAGAGCGTTGAAGAAGCAGAGCGTTTTGCCGAAGAA10.7194244604316548No Hit
GTACGTGCGGTTGGCGAACGATGGGGAACAGTTGACGTGCTAGTGACAAA10.7194244604316548No Hit
GTACCAAATGAGCACTGATGAATAACAGCTGTTTGTGATTTCCAACGCCA10.7194244604316548No Hit
GTAGACGGGAACGTCATGCGCGTACTTAGTCGTCTGTTTAAGATTGAAGA10.7194244604316548No Hit
AAATCAAGTTGACCGGTTGTTGGAAATTTACTGGGCCATTTATCCAGCTG10.7194244604316548No Hit
TCTCAAGCCAAATCAGAAGCAGCTGACGAATCTTTATTGGAATTTCGGTA10.7194244604316548No Hit
GGAGTCCCGTTGTTGTTAATAGTCAGATGAATAAAATAAGTTTTTAAAAG10.7194244604316548No Hit
TTTATTTAGCCGATCGGCGAATTGAACTAAAAGAAAAGGCGCCGCCAGAA10.7194244604316548No Hit
ATATAGACAGCCGATTTTATCGGCAATCCGACACTGTCAGCCAACTCCTG10.7194244604316548No Hit
CTTCGACTCCGAGTCGATTTTCCGCCGATACCCGGACATCGGAAAATGAC10.7194244604316548No Hit
CCTTCGATCATCAGTTTCTTTATCATTGTGCCAGTGCTCCCTTCGGACAA10.7194244604316548No Hit
ACTTCACCGTTTGCTTTCAATACCGGTCAAATCCCAGGCGTTTCCATATA10.7194244604316548No Hit
ATGGCCGTCGGTCGCTTCACGCCGCTTATCTTGACGCACTTTTTCAAACG10.7194244604316548No Hit
ACTCTTTTTCGCTCAGGCGCCCGGGAGAATCACCAGACGTCATATCGCCG10.7194244604316548No Hit
GAATTTTAGGGGACATAGTTCAGCCCAAAGGACCTGGGGGGACAGAAACA10.7194244604316548No Hit
GGCGATTGTCTATCAAAATGCTCCTCATGTGACAACGCCGTTGCAAATGC10.7194244604316548No Hit
GTATTATACGGCGTGTTTGATCTCTTGCGACAAATGGCGCTGCACAAACC10.7194244604316548No Hit
GCGCCAACACGATTTCCCAACTGCCAACCGTAAGGCCGACCGTTCGATAA10.7194244604316548No Hit
AAATTGCCGAATTAGAAAACGAACGCCGAAAAATTTTGCAAGACACTGCG10.7194244604316548No Hit
GTGCAACTACCGATGGTTTATCTGTTTCAAGTGCTTCTTTTATCACTTGT10.7194244604316548No Hit
CCCATCGCATCCATCGTCATTTGACAGGCGATTAATTTAACACCAAGGTC10.7194244604316548No Hit
CGTTCGTCCACCCGCAGCGACGCCGGAAGAAGATTCGATGTAGGCACTCG10.7194244604316548No Hit
TTCACATAGTGCGCCAAATTCATCCAGTAGTGGCCGGTCGGTTCAACACC10.7194244604316548No Hit
CTTGAATCCTATGTATATGAAGATGAAATAGAAGATGACCGGTTTGTTAC10.7194244604316548No Hit
AGTGATTTCCTTCCGCAATTGCCGGGCCTCTTTCGTATTGCTCGAACCAA10.7194244604316548No Hit
TTGCTGCAGAGCTCCGTGTTTCGCGGCCGGAAAAAAGCGGCGATTGTGCT10.7194244604316548No Hit
CTATGGAAACAGAAAGGGCAAGGCAGGGAGGCGTATTTCATGTTAAAAAG10.7194244604316548No Hit
AAAGAGACAAGAATTAAAAAAGCAGCAGGAAGTCGTCAAAGAACAAATTG10.7194244604316548No Hit
CCCCTTCGGCTAAAGGAGGGGAGAAGGATCATTTGGAGGAAGCAGAAAAT10.7194244604316548No Hit
CACTTCCCTGTTATCAATTGTAACAGAGACAAAGCTGCCGCTTTACGCTG10.7194244604316548No Hit
GTTCAAATTCATCCGGTGTTTGTTTTCCCATGTTGGTTTCACGAATGTCC10.7194244604316548No Hit
CCCAATAAAGAGACCGCACGCTTCCTCCTGGATCAAACGTTAACGAAGTG10.7194244604316548No Hit
GTTTGCGGGCGTTAAACAAAAGAAGGAGATTCGGCAAGACGGTATAGAAA10.7194244604316548No Hit
GAGCTATACACCGTCGCGGCGTGTGCAGGCGCCGCGTTTCTGTGCCTGGT10.7194244604316548No Hit
CTCCACGGGTAACTGAGTATATTCAGGGCATCTGTCGACGCGATCCTTTC10.7194244604316548No Hit
GGACGGAGATATCGGTCATATTGAAACGTTTTTAATTGATGATACATCGT10.7194244604316548No Hit
GCTTACAGCGCCTGTTTCCGCCGCGAAGCTGGTTCGGCCGGACGGGACAC10.7194244604316548No Hit
GATCAGACTGCCTAGCGCAACACGAACCGACACGGCCTTTTGACCTTCAA10.7194244604316548No Hit
TTTTTGCAATTGGCGCCGGGCCCGGTTATTTTGCTTCTCTCGTGCAAGAT10.7194244604316548No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)