FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003647234

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003647234
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences139
Sequences flagged as poor quality0
Sequence length146
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTCAAGATACAATGGTAAAAACGTTCGTGTCGCATCTGTCGGCCATTCT42.877697841726619No Hit
CTTCTTCTGTCCGAAACGTTTCAACGGTTAACACTGGGCCGAACACTTCG32.158273381294964No Hit
AACGTTGCGAAAGGCAAAGAAAGTGATTGCCGTAAGTCCAAGTCTTGCGG32.158273381294964No Hit
CTTCCGGTTTTCCTAAACGGCCGGCCGGAATGTCCTCCTCTAACCGCGAC32.158273381294964No Hit
GCATCCACGGTGACCGGATTGGCCTATCAAATTTTAAAACCATTTTTTGA32.158273381294964No Hit
TCCCAAGATATGCTTCAAGCACCGCCTCATTTTCCTGCACTTGTTTCGGC32.158273381294964No Hit
GTCAGCAACAGGGCCATGGCCTTGGACTTACCGATAGCGTGGATCAGGCG32.158273381294964No Hit
CGCTCATTCTTGGCAGTGTGCGGAAAATTTGCAAAGCTAGCGCGGCAACG32.158273381294964No Hit
CTGATCGGTGATGACGAGCACGGCTGGTCAGAGAATGGCATTTTTAACAT21.4388489208633095No Hit
GCGAACATCCCATTTTTAAGGAAAAAAGCACTTCCAACCGGAGGAAGTGC21.4388489208633095No Hit
CCTTCCGGGAAAGGGCCGCTTGATGCGGCCAATGCAAGACGAAAGGCTGG21.4388489208633095No Hit
GTGTGTATTCGGATCGCCACATGATTTTCCGTTCCCCTAACGAGAAGCAA21.4388489208633095No Hit
ACATTGCACTGATCACATTTCATCAGGAAATGATTCCGACAACGTTATTG21.4388489208633095No Hit
TTGCACTGCCCATTCCCATTGAAAACTGTTCATTGTCGACATGTCATAAT21.4388489208633095No Hit
ATTTTGGAGCGACAGTTAAAGGAAATGGCGACTATTTGTGATGAAATCAT21.4388489208633095No Hit
GAATACGATTTTCGGATGCCTTCCTTTTATTTATATCGATTCATAAATAT21.4388489208633095No Hit
GTGATTCATTTATATGAACGCGATTGTTCGGTGCAGCGACGGAATCAGAA21.4388489208633095No Hit
GGTGTATAGATTGTGAAGATTTTCTCCCACTTTGTGGGTTGTCTGTTTAC21.4388489208633095No Hit
GTATAAGGGATTAGCGAGCAAGAAAGCCCTTCCTTTCCAAAAGCCATCGC21.4388489208633095No Hit
AAGCAGGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCGG21.4388489208633095No Hit
TTGCAACACGAAAATGATGGGAGATTTGGGATGAAAAGATTGTGGAATGC21.4388489208633095No Hit
CGTTCAATCAGCAATTGGCTTTAAAAAGGAAGGATATTTAAAAACACAGC21.4388489208633095No Hit
GGGATATATGGTAGACAAGTGCGGAAAGGGAGCGCTGTCGGCATCCTTTC21.4388489208633095No Hit
CCCATATGGAGTGACAGAATTCAGGAATGTAATTTTCTAAAGGATGAGTC21.4388489208633095No Hit
CGGCTGTTTCATGCTGATGAATACCGGCGACTCCGGTGTAGCCTCTCAAC21.4388489208633095No Hit
CCGCAGAAGGCGGAAGGGAGTCAGCTTTGGACCTGGGAGAGAAAGGAAGC21.4388489208633095No Hit
AAGCAAGGGTGTCCACCGTGAGGCGGAATCTGAAGGAACCTGGAGGCAAA21.4388489208633095No Hit
GGCCGGGATGGAAGTTTCCGCGCTGCTTGGCCGGATGCCGTCGGCCGTCG21.4388489208633095No Hit
TACTCATTGTTACATTTACAAATTCTGCCGCACAAGAAATGCGTGCTCGA21.4388489208633095No Hit
AAAATGAGCAAGCGCCTAGGGTTCACCCGTTTCTTGGGCCGGCAATGAAG21.4388489208633095No Hit
ATTCTGTGTCTAGTATAAGAAGAGGTCATTTTACAGACGATAAAGACATC21.4388489208633095No Hit
CTGCAATGCCTGTGCGAAAAACGTTAGATAAAATCAATCCGTCAATCGGC10.7194244604316548No Hit
ATGCTGCGCCCGGCCTTTGATTTCTGCCAATAACTCCCGTTCACGGCGGA10.7194244604316548No Hit
TTTCATCCTAATATAAAAATCGATTTAGAAATGAAGAACGAAATGCCTGC10.7194244604316548No Hit
CCGCACAATTGAACACGGGTCGAAATCAAAAAGCTCAGAACCTATGCTTT10.7194244604316548No Hit
TCATCACGTAGCGCGACAGGCGGCGGATGTTGCGTCGGTAGCGCAGGATC10.7194244604316548No Hit
GTCCCATACTGATATAAATAATGAAGAAGGGGAGGCAAAACGACTGCAAA10.7194244604316548No Hit
CTCACATTGCGACATTGCCGCCGAAAGTGTTGAAGCAGCTCGTTTTGCAT10.7194244604316548No Hit
AGAGACACTTTATCAACGATATAAAGAATTATCCGACCAGTTGGTTGTTC10.7194244604316548No Hit
CTCCGGATGTTTGCCGATCTCTTCACTCTGTTCTTCCGCTGATTTGACAA10.7194244604316548No Hit
TGCCGGTTTTTTGCGCCAATTTTTGCATTTCTTTCTGATAGCGGCTGGCA10.7194244604316548No Hit
AAACTTGCCGTTCAATCTCGTAATGAGCGCTTGGTATTGTATTTGTTGCC10.7194244604316548No Hit
TTGAAAAAGCTTGCTGCGAGCGGCGAAATTTCGGTGAGTGGGATTAATCT10.7194244604316548No Hit
GCATCGACCCCGAATTAAATAAATACCAAGGAGGACTCAGAGATGAATTA10.7194244604316548No Hit
CGTCTAGCGGGCACGTTTAAAATAATGCGCATTCCTTTTAACTATTTTCC10.7194244604316548No Hit
GCCTGTACGCTGCCGTCTTCTCTTTCTTACTCGTCACACTCTTTGATACG10.7194244604316548No Hit
CTCGAATCTGGAAAAATGAGAACGTTTTGCCGCTAAAAAAAGCCATTCAA10.7194244604316548No Hit
GTGTCCTCCTGTGGCCGGAAAATGGCGGCCACGATGTGACCGGTGGCATC10.7194244604316548No Hit
GCAGGCGTCTGTCCATTCTCTAAGACATGTGATGAAATGAAATCAGGAGG10.7194244604316548No Hit
CTTCAAAAACGGTCTGCCCATAATGAAAAACCATCGCAGCCGGTTCGATA10.7194244604316548No Hit
CAACGGATCATGATTTAAAAATTGCCAAAAAACTGGCTTATGTACTTGCC10.7194244604316548No Hit
CCCTCTTACAATCGGCAATAGCATTTGCAACGGCGTTGTCACATGAGGAG10.7194244604316548No Hit
GCCTGTTCTTCTTTTTGCTCGGCAACAGCTTTAGCCGCCAAAGCAAAATT10.7194244604316548No Hit
GTTGCAGCCCTCAGATACATTCAACGATCGCGTAAATATTTTTTTCCTTC10.7194244604316548No Hit
CGTAAAAAAGCTTGCACTTGGGAGCGATCATCATGTAAGAACATAATGAA10.7194244604316548No Hit
GCCCTGAATAAATGCCGATTCGCATTGTAGAATCTTTCTGCTGTAACAAA10.7194244604316548No Hit
CCACTGTTTGTGTCGAGCGGGAAAAAAACAGACGCCACCATTCGTTCATG10.7194244604316548No Hit
GTGCAACGAGGCGCGGAACTTGTGTCAGGAACGATTCAATTACCCCTTTT10.7194244604316548No Hit
TTCTAAGACATCTTGCCCCGCTTTATGTCATGTGTGACAGGGGAGATCTT10.7194244604316548No Hit
CTTTGCTTACTTATTTTACCCATTAACTTTTATATTACAGCTTCCCGAAC10.7194244604316548No Hit
CTTTCATAAAGAGAAAGGGCTGCTGTACGAGCATCATAAAACTGAAAATC10.7194244604316548No Hit
GTGCGGGCTCAATACTTTCATCGACTTTACATTTTTGGCCGCTTTGCAAT10.7194244604316548No Hit
TAAAATGGCATAATAACCTTTTTCTCCCGCAATATCGACAACGGATTGGA10.7194244604316548No Hit
GATGAAGCACGCCGATACAGTCACCGCTCGCGAAATTATGAATTTCCTTC10.7194244604316548No Hit
GTAGAAAGGGGCGACTAATCCCCGGCTTTGGGTTGAGAGGCCACCTAATT10.7194244604316548No Hit
GAATTTGATGATATTCCATCCATGTTTGATTTTATGGAACAAATTCGAAA10.7194244604316548No Hit
TTATACTTCTTGATATCGCCGACTTCGGCAAAGAATGAGGCGATCGTCAA10.7194244604316548No Hit
CATTTGATAATGCTGTATAATGGCCGGATTTTTCATAAGAATCATTGGTT10.7194244604316548No Hit
CTTGGAAAGAGGCTAGAGCAAATTGAAAGAAACAGTCAAGGAAAGGTAAA10.7194244604316548No Hit
AATCAAAGAAATGTTACTCGAAGAAATTGCAGGCGATGCGTATAACTATG10.7194244604316548No Hit
ATAAACAATAATAGATGGGGTGAGGGCGTGGAATCTCAAAAAAATGGCTG10.7194244604316548No Hit
CCTAGCAACTGTCGAACTCGGGATTCTTTCCTTATGTCCTTTTGAATAAG10.7194244604316548No Hit
ATTCCATTCCATTCCATTCCGGATGATTCCATTCCATTCCATTCCATTCC10.7194244604316548No Hit
GGACGAAATTTTGTATGAGTTGCGAGAACATTCGGCTGGTCTAAATTGCG10.7194244604316548No Hit
ATCCAAAAGGTGTTCCCGAATCACGTCGGAGTAATCGGCACCGGTTTTTA10.7194244604316548No Hit
TCCCATCGTAATAAAGACCATTCAAATTGTCGATCTCATGCGCCTGAATA10.7194244604316548No Hit
GACCAAGCTCTCACCCAGTTGTCATCTGACTAGCTGCTGCAGCACTGAAA10.7194244604316548No Hit
GCAAAAGGGGCTGTCGTTTTCTTTTTAATCATTTGAATCTGTTTTTCCAG10.7194244604316548No Hit
GCCGAGATGGACGAAGAGATCAAGGAGCGGATGCGCCCTTTTGAAGAAGA10.7194244604316548No Hit
GTACTGGTCTTCTGTCGCGATGAGCGCTTGTATCACATAATCAGACACTT10.7194244604316548No Hit
GCTTCTTCACCCGTAATCCATTTGCTTTCTCCGGTTTCCGTCGCCGTTTT10.7194244604316548No Hit
GCACGGAACAATCGCGTTCGTAAAGATGGACGGTATTTCCAGCTTCGTCA10.7194244604316548No Hit
CGGCGGTGTTTCTCTTTTGCTTGTTCCAACAACATTTTTGCCGCTCGATA10.7194244604316548No Hit
GTAATAACCTTGTGAAGTATGTAGAATATGTTTTTAATGTAGAGCTTTTT10.7194244604316548No Hit
TTCAAGAGCTGGTTGATTGCCGTTTCCAAGTGACGACGAAAAACCTCTTC10.7194244604316548No Hit
CTGACACACGGTGTCGACAACCGATAGCGAGTTCGGTCCGCGGTCTGTTA10.7194244604316548No Hit
CTATCAAATCAATGAGATTGCACACGTTCGCCGTTTTCGCAGGGTTTTAG10.7194244604316548No Hit
ACATTACACGAAAGAAATGTATTATCGACTTTTAGCGCATCAATTTTTAC10.7194244604316548No Hit
GGACGAGGATATTTACGTCGTTTGTCGAACCGGACACCGTAGTGATTTTG10.7194244604316548No Hit
GCCTTAACCGAACCGCAAGCCGGTTCCGATGCAGCGGCCATCCGTCCGAA10.7194244604316548No Hit
GTATCAAAAGCAATCGGGACGCCGAGCTCCTGCAGCAGCGTTTCTCGCAA10.7194244604316548No Hit
CACTCGGCTCCAACGGATCGGCTGTCTCCAACGCCCCCGTCGCCAGCGGC10.7194244604316548No Hit
TAACTCCTGCGGTAAAAAACGAAAGAGGCGATGAAATTGGAAAAATTAAA10.7194244604316548No Hit
CCTTCCACCACTGATGCCTTGCATGGCCATTAATTTGCAATAGTCATCTT10.7194244604316548No Hit
GCCCCGATCTGAACCGTATATTCATAATCACCGTTTTTTTTCCACGACCT10.7194244604316548No Hit
TCCTTCAACGACAACGCAATCCCCATCCTTTTCCGCTTTATATTTGTGAT10.7194244604316548No Hit
GTATAAGGGATTAGCGCGCAAGAAAGCCCTTCCTTTCGAAAAGCCATCGC10.7194244604316548No Hit
GCTTTGCTTTCTGCCTGTTATAAAAGATTCAGGTTCCCTAAGCTCAGTAT10.7194244604316548No Hit
GATTTATGGTGGGGTAATTGCATTAAGACAATAGGTGTATCGGGATCTGC10.7194244604316548No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)