FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003647243

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003647243
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31
Sequences flagged as poor quality0
Sequence length146
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGACGACTTCCACGGCGTGAGCGGCGTCGCCCTCTCGGTCCCGGCCGTCG26.451612903225806No Hit
GTATTTTCTCCTGCATCTCCTTTAAAGCTGGGATCACACTGTGGCTCAGA26.451612903225806No Hit
GGAATGAAGAACAGATGGGACAAACAGAACAGATGACAGAATGGTAGACT26.451612903225806No Hit
GCCATGGCGCGAACGGCCGCCCAGGCCTTGTCGTCGAGTTTGCCGTCAAA26.451612903225806No Hit
GAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGACACTC26.451612903225806No Hit
CGTACAAAGAGCAGCCGCTCAAGACACCTGGGAAGAAAAAGAAAGGCAAG13.225806451612903No Hit
AGCTAATTATGGTCTACCACAGAAAACAGGGTGTTTTATGCATTGAGAAT13.225806451612903No Hit
GCACTATGTCTGATACAAAATAGGCTCTCAGTAAGTGTGTTTGACTGGTT13.225806451612903No Hit
GAAGAGGAAGAAGCACTGCCAGCTTCGCGCCGAACCCGAGGTCGATGTTC13.225806451612903No Hit
GTCTTAATACCCATCCCATCAAAAAACAATGCGGGGTTGTTAAAATAACA13.225806451612903No Hit
GGAAAAGGATCCGTACCTGCCGCCGTACTACCACCCGGGCAAGGATTCCC13.225806451612903No Hit
CAATAAGTGTATGCAGGTGCAAGGAACATAAGGATTCCTCAGCATAGGAT13.225806451612903No Hit
ATGGAATGGAATGGAATCAACCCGAGTGGAATAGCATGGAATGGATTGCA13.225806451612903No Hit
GGACAGGACAGACGCCTTGCCGGTTTCGTTCCAGATCGTGATCTTCGCCC13.225806451612903No Hit
GGACCGGCCTTCTGCTCTACGCCGGACACCTCGGATTGCAGGTCGTGCGC13.225806451612903No Hit
AAGCGGGCCAGTCCGCCGATCCCATCGCCTTGGGGTTGGAGGGGCTGTCG13.225806451612903No Hit
CTACATTTCAGTTCCAAGTAGTTGTACCACAGTCATAAACACAACCACAA13.225806451612903No Hit
CTTCCACGCCTTGCGGCAGCCCGGCCCGAACGGCGCCGCGCCGGTGCGCG13.225806451612903No Hit
GTGTTGTGCAGACAGATCAGGAGTGGTAAAAAATAACTGGTTGACACCTG13.225806451612903No Hit
GTCGTGCAGGTAGAGGCTTACTAGAAGTGTGAAAACGTAGGCTTGGATTA13.225806451612903No Hit
GGTTCCAGAGGGTCCGGCCGGCTTGCCGCCGGTGCGTGGCCTTGCGTCCC13.225806451612903No Hit
GTCATGAAGCCACCATTGCAGCCTTTGTTTCCATATTTTTCAGTTGAGCA13.225806451612903No Hit
GATCACGCCCGGGTTGAACATCTGGGTGTAGCCGGCGTTGAACCACGACG13.225806451612903No Hit
GGAGGCGATGCTCGGCGAGGAGGCCGTCATCGAGATGATCGAAGAGGGCC13.225806451612903No Hit
GATGGTAGCTTCGCCCCATTGGCTCCTCAGCCAAGCACATACACCAAATG13.225806451612903No Hit
TAGGCGTGGTCGGCGTGGGCAACTGCGCCTCGTCGCTCGTGCAGGGGATC13.225806451612903No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)