FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003647244

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003647244
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31
Sequences flagged as poor quality0
Sequence length146
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAGATGCCTGCTCCAGAATCTCCTCCTGGAAGGGATCCAGCTGCAAATT26.451612903225806No Hit
TTTCGAGGGACCGAATGTCTTTGGCCACCAAGCTCAAGGACCTGCGGGTC26.451612903225806No Hit
ACTTTAAATCCTTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGC26.451612903225806No Hit
GTTCACCGTCGAGGAGCTCGACCAGATCGCCGTCGACGTGCGGGATGCCG26.451612903225806No Hit
ACCTCCCGGGTTCAAGGATTCTCCTGCCTCCTGAGCAGCTGGGATTACAG26.451612903225806No Hit
GGAGAGATTGTTACAGAGCAGCAAACTGGGCAGAAAATCCAGATTGTGAC13.225806451612903No Hit
GCATATGGGTCAGTATGTATGTGTGTGCAGAGTCAGAGAGGTAAGATAGC13.225806451612903No Hit
CAGCTTCAGCTGTGCTTCCAGGGCCCCCACAGCACTGAAAGCCCAGCTGA13.225806451612903No Hit
CTTCTAGCCCACTCCCAGTCACTCCAGAGTCTAACCAGGCAGAGCGAGTT13.225806451612903No Hit
CATTGGACCAGGCAGTAATATCCCTTGAACACAGTGGAATTAGGTCAACC13.225806451612903No Hit
GACTTTCATTAATCACGTAATTGTGTATCTGAAGTTTTGCTTGCTGGAAA13.225806451612903No Hit
ATTCCATTCCATTGCCTTGCATGCCACTCGGGTTGATTCCATTCCCTTCT13.225806451612903No Hit
CTAATAGGGAACGTGAGCTGGGATTAGACCGTCGTGAGACAGGTTAGTTT13.225806451612903No Hit
CTCATAGGCCTGTCGCGCCCCTTCCAGGAACCGAACCGGATCGAAAGCGG13.225806451612903No Hit
CAAGGGCGTCGAGCGCAGCCGCATGCTGGTGGCCCAGGTGCTGATCTTCT13.225806451612903No Hit
GCGGATGCTTGATCAGACCCAGCAGCACATGCGGGTCCAGTGGATCGGCG13.225806451612903No Hit
ATTGCTATGTTGGGTTTATGGGGTTGCTATAAACGGTTTTGAATAAACGC13.225806451612903No Hit
GCATCAGACCGGGCGGCGGTTCGTTGCTGGTCGCCGCCGAATAGTGGCTG13.225806451612903No Hit
CTCCACGCCCGAGGCGCTGGAGCAGGCCGCGCGCGACGGCGTGGGCGTGG13.225806451612903No Hit
CCGCTAGATGACGGTGCTTCAAAATTAGATGATCTGCACACTCTGTATCA13.225806451612903No Hit
AAGGACGGGTGGGCCAAGGCCAAACCCAAGTTCGAGCACAAGAAGACCTT13.225806451612903No Hit
GGCCAGAAGGTGCAACTGATGTCGTGCGAGACCGGCAAGGGTACCGACCC13.225806451612903No Hit
GATTAAAAATGCCCTAGCCCACTTCTTACCACAAGGCACACCTACACCCC13.225806451612903No Hit
CTACGCCACCAGCCACGACCCGCTGGACAAGGACACCGACATTCAGGCCG13.225806451612903No Hit
TACTTGATCTCCGGGGAATCCTTGCCCGGGTGGTAGTACGGCGGCAGGTA13.225806451612903No Hit
GTTCGGGCTGGGTGCGGATCGCTTCCGGGAGGGTCAGCCGGACGCTGGCG13.225806451612903No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)