FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003647246

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003647246
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33
Sequences flagged as poor quality0
Sequence length146
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTA39.090909090909092No Hit
GTTCTCGGCAGTAGGTTTGCCCCAGTTGTCCCTGATGTGAACCTCATTGG39.090909090909092No Hit
CCACCCTGCGCGAGGCGCTGCGCTTCCTTGAGTTGCAAGGTGTAATTCAT26.0606060606060606No Hit
CCCTTATTTCATTTGGCACAATGTCCTCCAGGTTCATCTATGTTGTCACA26.0606060606060606No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTATA13.0303030303030303No Hit
ACCCAACAACTTGTTGCCACTACCAGGGTGGCTGCGATGAGACTGACAGC13.0303030303030303No Hit
AATCAAGATCAAGCGAGCTTTTGCCCTTCTGCTCCACGGGAGGTTTCTGT13.0303030303030303No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG13.0303030303030303No Hit
AGATTTCACTGTCGTCCCACCCCACTTCTTCCACCCCACTTCTTCCTTCA13.0303030303030303No Hit
TATCAACGCAGAGTACATGGGCTGCAAGAAAACAATCTCCTCAATTAGCT13.0303030303030303No Hit
GAGACCAGTTCGTAAATATCCGAAAGCGTGACCTCGTTGAGGTCCCTGCC13.0303030303030303No Hit
GTTTGGCGGTGGCCAGGCCGTGCTCGGCCAGCACAGCGGTCCAGGCGGCC13.0303030303030303No Hit
AGCTGGTTCTCCACAGCATCAAGCTCAGAACTTGGTAATCCCTGAGCTTC13.0303030303030303No Hit
CCGTTTACCCGCGCTTCATTGAATTTCTTCACTTTGACATTCAGAGCACT13.0303030303030303No Hit
GTCATAATCCCACAGATGGTAGCTTCGCCCCATTGGCTCCTCAGCCAAGC13.0303030303030303No Hit
CGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCA13.0303030303030303No Hit
GGCCGGGAGTGGGGACACCGCACCGCAGCACCACGGCTGAGGGGGCACCC13.0303030303030303No Hit
GAGTGTAACGAAGCCATGTGAGCACCTTCCAATCCATGTCAATGCACGTC13.0303030303030303No Hit
ATGAGATACCATCTCACACCAGTTAGAATGGCTATCATTAAAAAGTGAGG13.0303030303030303No Hit
CCCTATCGCTTCTCAGCCTTTTGGCTAAGATCAAGTAAAAAAACAACACC13.0303030303030303No Hit
ACAGTTATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCACTCCCGACCC13.0303030303030303No Hit
AAACAGGTGTTGTAAAAACACTTGTTTTTCCCGGGTGAGATTCTGGGTCA13.0303030303030303No Hit
CTCTGTCACTTAGAAATGATTTCTTTTTCTAGACATAAATATTTCTTCAA13.0303030303030303No Hit
ACATATCGATGGAGAAATCCGGGACCTTCTGCATCTCGGACTGAACCTGC13.0303030303030303No Hit
TCGGCGAGGCGCTCACCACCTGGGTGCGCGGCGACTTCACGCTGTCGTCG13.0303030303030303No Hit
CCACCACCACAGGAACCCCGAACCGCCGCATGTTCTCCACATGACGCTGC13.0303030303030303No Hit
AACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATCAAT13.0303030303030303No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)