FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003647249

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003647249
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences151
Sequences flagged as poor quality0
Sequence length146
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTAAAAGGATGAGAGAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAG31.9867549668874174No Hit
GCAACCCATCTGATTTACCGAGTAGAGCTCGTTCAGGACCTTCATCAAAT31.9867549668874174No Hit
CCGCGGCGATCAGCGCCGCGGCGGCCGAGGCGGCAAGGCGGCGCTTCAGA31.9867549668874174No Hit
CCAGCCTGGGTGACAGAGTGAGACTGTCTCAAAGAAAAAAAAACGGCAGT31.9867549668874174No Hit
GTTCTAATATGTTCATTTTCCATGTCAAAGGCTATGAAATAGATATGAAA21.3245033112582782No Hit
CGCCTGAACAACCGCCGCGACCTGGTGTTCATCGACCAGCGCGGCACCGG21.3245033112582782No Hit
GGCTAGTCCTGTCTAGCGCGCCCATTTCGAGCCCAAGTTTCCAGCTCGGG21.3245033112582782No Hit
TGCATACTTAGAGGAAAAGCCTGAAACCCTAATCTCTAATAGTTGAATTG21.3245033112582782No Hit
GCCCTGAAGAGGATGTAAATAAAGGGGTAAGGGTAGAAAGTTTATTCAGA21.3245033112582782No Hit
TTTCAAGCTTGGCTATTGAACGATCATAGTTGCTTTGTAATCTGTGTCTG21.3245033112582782No Hit
TTTCCATACCGGCTGTATTAATTTACAAACCCACTGATACCTTATGAGTT21.3245033112582782No Hit
AGGTAGTGCTGCCGACTGGGAGGAAGCTCGAAGTGTGGAAACAGCATGGT21.3245033112582782No Hit
GAAAGAAGACCCTGTTGAGCTTGACTAGTCTGGCACGGTGAAGAGACATG21.3245033112582782No Hit
GTTTTTATGAGAGTTTTTAGCTTGAAGGGCTGTTGAATTTTGTCAATGGC21.3245033112582782No Hit
ATCTTACATTTTCACACAATATCTCTAAAATGTGCCACAGATATTTTTCT21.3245033112582782No Hit
CAAGTTAAAAATCCTTAGGAGCTTATCACTATCAACTCATGGGTATTGCC21.3245033112582782No Hit
ATGATATTCTGAGAAATATGCACTATCAAAATTGACCTAAAACAAAGAGA21.3245033112582782No Hit
GAGAGGGGCGCCCAAATGTCTTCCAATTCACAGCGAAGTGCACGAGGGTC21.3245033112582782No Hit
ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC21.3245033112582782Clontech Universal Primer Mix Long (96% over 26bp)
TTTCAGTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTCTGAC21.3245033112582782No Hit
GATTCAGTGTCCTGTGATGGCCTGCTTCCTGGTTCCTAAACAGCTGTCTC21.3245033112582782No Hit
CCCACTATCTCTCGTCTTCTTTTTTTAATTTTAGTTTGTTTATTTTTGAG21.3245033112582782No Hit
CTGCCGTGTCGATCACCTGGCCTGCATTGCCCGAGACGTAGGCCACCAGC21.3245033112582782No Hit
TCACCGACGTGATCCGCAAGGCGAACGTGTCGCTGGACTGACGCGGCGGG21.3245033112582782No Hit
GCTCTGGAATGATGACAAATTGCATAAATTGGACTAGAAGAAGGGGAGGG21.3245033112582782No Hit
GGGTAGGCCTCATTCTCTTAGCCCTGCCCAATTTAACTTTTTGTTAGGTT10.6622516556291391No Hit
GAATCAAATGGAATCATCAAATGGACTCGAATGAAATCATCATCAAACGG10.6622516556291391No Hit
CCTCCTGTCTGCCTAGCCAGGATCATAATACCTCAGTCATACCCCACACA10.6622516556291391No Hit
CTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAG10.6622516556291391No Hit
ATACCGAGCTTTGAGGTGCAAAATTGAGAATGTTGAACAGAATACTGAAG10.6622516556291391No Hit
AAGCGTCAGATGTGTATAAGAGACAGATCAATCTGTCAATCCTGTCCGTG10.6622516556291391No Hit
ACATGATTGTATATTTAGAGAACCCCATTGTCTCAGCCCAAAATCTCCTA10.6622516556291391No Hit
CCTCTACTGTAGACAAAACATGAACACAACTAAGCCATACATTGTCAAGT10.6622516556291391No Hit
ATACATATTTTAAACCAGCAAATATAGCACAAATGTCTTTAAGGACAAAT10.6622516556291391No Hit
GGCCAAACTCATGCTGTTTTCAAGGGACATGTCCTACTCAGCATTTGTGC10.6622516556291391No Hit
GTGCGGAACGGCTGCGAGTCTTTCCGCTCCTGGTCGCGGGTGGCGTACAC10.6622516556291391No Hit
GGGAAAATGTCCTCTTGAAAGTCTCATCTTAATATTATGTAACGCGGCCT10.6622516556291391No Hit
GATTTTGAGATGGGGAGATTTTCTTGGATCATTGGGTGGCTCAGTGTAAT10.6622516556291391No Hit
GGGACTGGAAGGCTCAGGGGCAGGCGGTGAGGCCTCTGGCAGCGAGGAGC10.6622516556291391No Hit
TCTCGGGACCGAGTCTAGAGCCGGCGGGGCCTGGTGTGGAGCGCGCTTCA10.6622516556291391No Hit
GCAGTCCATTGGCACCGAGAACACCGAGGAGAACCGGCGCTTCTACCGCC10.6622516556291391No Hit
CTTTTTAATGATCTCCATTCTAACTGGTGTGAGATGGTATCACATTGTGG10.6622516556291391No Hit
CCCAAGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTNAT10.6622516556291391Clontech Universal Primer Mix Long (96% over 26bp)
CTGCCATCTTTTAGCAAGCAAAAACAAGAGATTCAGCTCACCTCATACTG10.6622516556291391No Hit
CGGCCGGTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGCTGTC10.6622516556291391No Hit
CATCCAGTTATTGCCCATTCTGGGTGTGTTGAGCGTTTTAAGTTTGCTAT10.6622516556291391No Hit
CTATAGTGCTGTGGCATGATCTTGGCTCGCTGCAACCTCTGCCTCCTGGG10.6622516556291391No Hit
GAACTGGTGCGGACCAGGGGAATCCGACTGTTTAATTAAAACAAAGCATC10.6622516556291391No Hit
CTCCGGTAGTAGTGGGGGCGGCGCGAGAGGACGTCGAAGCCGCGTGAGCG10.6622516556291391No Hit
TACCTACACATAGCTAGCGGCTGCAATATTGGACAGCACAGCTATAAACC10.6622516556291391No Hit
TAATAAAGGTAAAGACAGGGCTACATTTACTTTGTAGAAAGTTCATTGTG10.6622516556291391No Hit
ATACTATGTAGCCATAAAAAAGAAAAAGATCTTGTCCTTTGCAGGAACAT10.6622516556291391No Hit
CGGTAAGGTGATATGATCTACAACCCACCCAAAAATGCTGTCTCTTATAC10.6622516556291391No Hit
CCTCTTGGGAGAGTCTTAGACCTTGACAAAAACCAGGTGGGCAGAGTGCA10.6622516556291391No Hit
GGACAAACCACTCACTAATCTAATTGGTATCCTATTGCTCCTTTTCTCTG10.6622516556291391No Hit
ATACCGAGCTTTGAGGTGCAAAATTGAGCATGTTGAACAGAATACTGAAG10.6622516556291391No Hit
GGTGGGAGGATTGTGTGAAGCCAGGAGTTCAAAATCAGCCTGGGCAGCAT10.6622516556291391No Hit
CACCAGCTGCTCAAAAGCCTCGTCCACGTTGAGACGCAGTTTGGCCGAGG10.6622516556291391No Hit
AACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACTTTCTGTC10.6622516556291391Clontech Universal Primer Mix Long (96% over 26bp)
GATAACTGGCTTGTGGCGGCCAAGCGTTCATAGCGACGTCGCTTTTTGAT10.6622516556291391No Hit
CTCACTGTGAGTCCTTGACGTCAGAGTCAGAACTCTAACAAACAGACAGC10.6622516556291391No Hit
ACTGAGGGAGCTGAAACACAGCAGACAGCCTGTCTCCTAATGAAAAGGGG10.6622516556291391No Hit
ACTGATGATGTGTTGTTGCCATGGTAATCCTGCTCAGTACGAGAGGAACC10.6622516556291391No Hit
AAATCCTGGAACCATACATCAGGATAAGGTGTCAAAAAGTGGAAAGTGTT10.6622516556291391No Hit
GTACAAATAATTGTCACACAGTTACACCGACCTGAACAATGACGGCAATC10.6622516556291391No Hit
GAGCGTAACTGTGTGGGCTCCTCGCTGCCAGAGGCCTCACCGCCTGCCCC10.6622516556291391No Hit
TATTCCCCTCTGGCTGCTCCTTGACCATGTCTCTGATACCTGGGATTAGG10.6622516556291391No Hit
CTTTTTATCTAGGAATTGTCAAAGAGAAGATTCCAAATTGGAAGGATACA10.6622516556291391No Hit
GAGTTTAACCTTTCTTTTCATAGTGCTGTTTAGAATCACTCTCTTTTTAA10.6622516556291391No Hit
CTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAAT10.6622516556291391No Hit
CTTCTGTCTTGTTTTTATGTGAAGATATTTCCTTTTAAACCATAGGCCTC10.6622516556291391No Hit
ATGCAAGAAGATGCCAACTATTATCAGAATTTTTTTGCTATCCTCACATA10.6622516556291391No Hit
CTACAGCCTTATTTAGCTTTTCTCTTTGTGGGGTCTCAAGGCAGAAGCTG10.6622516556291391No Hit
GGGAGCTGTAGACTGGAGCTGTTCCTATTTGGCCATCTTGGCTGCCTGAC10.6622516556291391No Hit
GTTCTTTTCTATGGAGTTCATGTTCAACTTTTCTCTATGCAACTTTTTAT10.6622516556291391No Hit
GAAGCCGCGCAGCGCGACGTGACGCTGTTAAAAGACAGCGTCGATATCGT10.6622516556291391No Hit
GAATATTTTTGTAGTATACCTTCAGTCTCAACACCTCTCTGCTCCTTCTC10.6622516556291391No Hit
GAAAGAATGGAGATGGAAATGTTTAAGAGGCAGTTAGAAACAAGGGAAAG10.6622516556291391No Hit
GAACTAGTAGAGTGGGGTGCTGCTGAAAAAATACTGAAAATGTGGAAGCA10.6622516556291391No Hit
GGCTGAGGAAGAATTGGGACCTAGCTCGGCCTGGTGAGGAGCAGCCTGGG10.6622516556291391No Hit
GCTGGAGCAGCTGGGACACAGGGCACCAAGTCCCTAGGCTGCACACAATA10.6622516556291391No Hit
TGCAACTACTTAACTCCACCATTGAAGCAAAATCAGACACTGCAAGAAAA10.6622516556291391No Hit
AAATTTGGACATCATTTTTAGCACTTCACTGAATATGAGAAAAACTAATA10.6622516556291391No Hit
CAATTAAGGCAAGAGCCTGAGAAATGAAACATATTTTTTCTTACTCTTAA10.6622516556291391No Hit
CCTCATGATCCGCCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGT10.6622516556291391No Hit
ATAGGTTTGGGGAGAACAGTTCGGTATACTCTCGACACATCATTTATTAC10.6622516556291391No Hit
GGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTATAAAGTATTT10.6622516556291391No Hit
ATCCACACATGTATCTGAGTTTCCTATCAATACAATTCTAGCATGGATAA10.6622516556291391No Hit
AAACTGATGAGCAGTGGTTGAAAAAGAGTTGCTTTGCCCAACAGCATGGC10.6622516556291391No Hit
GTGTGGACATCTTCGGGAAGCCCAAGGCGCTGCTGAGAGAACAGGGGACG10.6622516556291391No Hit
GACTACTTGTGCTCCATTTTACCTGAAAAGGTGGAAATAGATACTTCATG10.6622516556291391No Hit
GAAAATATTGATTGGACATCTGGTACCCTTTGGCCCCAGTCCTTTGCTCT10.6622516556291391No Hit
AACCAGCTTCGTGGGTCGTCAGTGAATACGCACCTGGCAAGTCGATCGAA10.6622516556291391No Hit
CAGATAAGCCGGCAGGGTCCAGTACAGAAGGCTTTTGTTCTTTGCATAAT10.6622516556291391No Hit
GTTCACCAGTGAAAGTTGGTTATTTTTTTCCATCCTTGCATCAACTAAAA10.6622516556291391No Hit
GCGCCGGCCGCGATGCCCGCCAGCGCGATGAGCTTGATGTAGTAGCTGTG10.6622516556291391No Hit
AATTTGCTTATGAACCAGTTCCACATATAGTCAACCTATATGATTTTCTC10.6622516556291391No Hit
CCTCCCCAGTTTGCTTTGAAAATACAGAATCTGTCTCTTATACACATCTC10.6622516556291391No Hit
ATGTTGAACCTGCCTTGCATCCAAGGGATGAAGCCAACTTGATCGTGGTG10.6622516556291391No Hit
CCTGGGTCAGCTGTCAATTAATGCTAGTCCTCAGGATTTAAAAAATAATC10.6622516556291391No Hit
CAACGGAGGCCTCAAAGAGGTCCAAATATCCACTTGCAGACTTTACAAAG10.6622516556291391No Hit
ATTTTTAGTAGTAATGGGGTTTCACCATGTTGGCTCAGCTGGTCTTGAAC10.6622516556291391No Hit
GACACAGACAACTGGATGAGGGAGGTAAAGAATCAAAACAAGGGATACTG10.6622516556291391No Hit
GTTCTAGCGACGACCGGGCCTGCCAATCAGCCCACGGGTGGTTCCTCTTT10.6622516556291391No Hit
GATTATGGCAGTAAAGTGAGTCACACAAATTTTTTTGTTTCCCAGTGCTT10.6622516556291391No Hit
AGCGAACGCGCCTGCGCCAGGGCGCCGCCGAGCTTCTCGGGATCGGTCAC10.6622516556291391No Hit
GTGTGAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGACCATCCT10.6622516556291391No Hit
AAATAGCAACACTCAGATAAACAAGACATTTTAGAATTCTTAGAATATAA10.6622516556291391No Hit
TCGGCAGACTGCAGGCCGGAATGAAGGGGTCGTTGCGCGCGTTCACCACG10.6622516556291391No Hit
GTTCTGTAGAGTAAGATTCCTCCCTTGTCCTAAAGTCCTGATGTGGGTGA10.6622516556291391No Hit
GGGCTTCTTTCCAGTTGGTGCAACAGGAGATCTGGGGCCTGGCTCAGGCA10.6622516556291391No Hit
GTCAGGATGCTTCAGGCTGAAAACAAAAAAAAAAAAAAAAAAGAAAAGAA10.6622516556291391No Hit
CTGTGGGGAAAATGATTGAGCAACCTCCTATGCAGGGTGGAACAGAAATG10.6622516556291391No Hit
AGTAGGAGAGGAGCGAGCGACCAAAGGAACCATAACTGATTTAATGAGCC10.6622516556291391No Hit
ATCCGGAGAGTCCAGTTGCTCCCAGTGACTGCAGAGTAGCCACAAGGCTG10.6622516556291391No Hit
ATAGGCTTGTGTCACCATGCCCAGCTGATTTTTTTTTTTGTAGAAATGAA10.6622516556291391No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCGAGACGCACCTATCGCGTA10.6622516556291391No Hit
GGTTCAACTATATCAATAAGAAATGCAGTCAAGGCACCTGCAAATAGCAA10.6622516556291391No Hit
CTATGGAAAACAGCTGTACTTAAAAACTGCATAATCATTAGGTTGAATTT10.6622516556291391No Hit
CTTCAGAGTTAGCAAGACGATGGCCTCTTTATCTTTTCTCACTGCCATAT10.6622516556291391No Hit
GCACTCCAGCCTGGGCGACAAGAGTTAAAAAAAAAAAAAAAACAATGACT10.6622516556291391No Hit
GTGCAGAGCTATGTCAAAACGCACCTGTAGGCAGAGCCTAGATAAATTTT10.6622516556291391No Hit

[WARN]Adapter Content

Adapter graph