FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003647250

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003647250
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences151
Sequences flagged as poor quality0
Sequence length146
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAATACAGATTCCAGCCTCTCAGGAAATAAAACATTTAGGCTGAATACT31.9867549668874174No Hit
CTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGGGTCTCAATCTCCTT31.9867549668874174No Hit
GATGCAGACTGACCCGGTTAGCTCTACATGCCTTGTGAATCCAGTTAATT31.9867549668874174No Hit
GCTGAACGGGCTGGACGACATCGGCCTGACGATGGAGAAATCGCCCGCGA31.9867549668874174No Hit
GTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTCCCCGGAGCGGGT21.3245033112582782No Hit
GTTTTAGAATCCTTTCCTTTTCCTTGATCTTTGGGGGTTTGATTATTAAA21.3245033112582782No Hit
GAATCCTCTCTAACTCATTTTATGAGGCCAGTGTCATCCTCATACCAAAG21.3245033112582782No Hit
TCCTTCGGGTGAGCGCCCTGCGCTACGAGGCGCTGCTGGCGCAGGGGCGC21.3245033112582782No Hit
GTAAGAGAGTCCGTGGTAAGGTTTTCCTTTTACTAAACAGTAGTCTCAAA21.3245033112582782No Hit
GTTTTGGCCATAGGGCAGCGCCTCCAGCTGGGCTCGGCAGGCATCGAGGC21.3245033112582782No Hit
ATTCTACAACCCAAGTGACGGAACAAGCTAGGGGAAAGGCAAAGCCTTTG21.3245033112582782No Hit
GGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAA21.3245033112582782No Hit
ATATTAAACTGAAAAGCTGCTGCTCAGCAAAGGAAACAATCAACAGAATG21.3245033112582782No Hit
CAGCTGGAGTACCTGGGGCGGATCGATCACCAGGTGAAGGTGCGGGGCTT21.3245033112582782No Hit
GAGAAGAGGAGGCAGGACACTAAAAAGGTACAGCTCAAGGCGGCCGAGAA21.3245033112582782No Hit
GTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCA21.3245033112582782Clontech Universal Primer Mix Long (96% over 26bp)
TGGTAGCTTCATCCAATATATCATTCAAATGCATCTGATTTCTAAAACAT21.3245033112582782No Hit
TCAAATTTTGTTACTTATTACATAAGATATACATATTCATGTAGCACACA21.3245033112582782No Hit
CAGAGATGGAGACCACTCATCTTCAGCCACCCAGAGGACCCTGTGCATAT21.3245033112582782No Hit
ATCTGATCATTTTATGTTGAGTTGGTTAGAAAAAATGTTCAAAAGAACAC21.3245033112582782No Hit
GTATCCAACTGTTCCAGGTCCCTTTATTGAAAAGACCATCATTCCTCCAT21.3245033112582782No Hit
CCTAATAAGTGGCAATGCCATGCTAGCCCTCATGAGGATTTATAGTCCAA21.3245033112582782No Hit
GTTTGGGACCAGCCTGGGCAACATAGGGGGATCCCATCTCTACACACAAA21.3245033112582782No Hit
GAAGATGAGGGTGTTTACGTAGACCAGAACCAATTTAGAAGAATACTTGA10.6622516556291391No Hit
GCCGTATCGTTCCGCCTGGGCGGGATTCTGACTTAGAGGCGTTCAGTCAT10.6622516556291391No Hit
CATGGAGCCCACCATATACATGTCTGAAAAGGGAGGAAACTTTTTCCTTG10.6622516556291391No Hit
ACATTTCTCCCTTTGTTCACCCACGTGATATTTCAGTTACAGCCTGTAAA10.6622516556291391No Hit
ACTCTGATCCCAGGCAGCCTGAACACACTCTGCTCATCTCCTGAGACATG10.6622516556291391No Hit
GGCACGTCATCGTCGTGGATGTCGACCGACACGGTGCAGGGGCCACGGAC10.6622516556291391No Hit
CAAAAAGTGTATTCAATACTCCAGGGGTCTTTCAGAAGGTGTTGAAGTCA10.6622516556291391No Hit
GCGCCGGGGGCCTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTG10.6622516556291391No Hit
GACACCAAAGCTTCTTTCGAGGCACATGTCAGAGAAAAATTCAATCGAAT10.6622516556291391No Hit
GCTGTGGAACAGGATGAACTACTCAGGATTTTGTCTTATCTGAACTAGTT10.6622516556291391No Hit
GTGCCTAGCATATGATTATGTTTTCATAATATATGTTTATACATTTTATA10.6622516556291391No Hit
CGCAAACATGAATACAGACTGCTAGTGACCTGGTAGCACGTTCACAACAG10.6622516556291391No Hit
CCCTTGTCTACCTTGATGCCCACAACACCGCCCTTGGATTTGATAACTTG10.6622516556291391No Hit
CCAAATCTACGTCTGATTGGTGTACCTGAAAGAGATGTGGAGAATGGAAC10.6622516556291391No Hit
GATTTCAAGCGCTTTCAGGCCAAGGGTAGAAAAGGTAGTATCTTCGTATA10.6622516556291391No Hit
CCATGTTGCCTGCTCCTGAACCTTGTATGGAAATAGTCTACTTTGTCTTT10.6622516556291391No Hit
ATTCGATGCAATGGCAGTTCCACTGGGCCGACCGCGCCGCCATCTGGACC10.6622516556291391No Hit
GCATTCCTAGTTCTCTGCTGTCTCTTAAAGTAAACTCCCAATGGCCTCAT10.6622516556291391No Hit
CATTGTAACCATCAGCTATCTTGTGAACATTAAGGAAAGCAGACTTAGGG10.6622516556291391No Hit
GAGAAGCCAGAGACTTTCGCTTCCGGCTGCCGCAGGCGCTTCGCTGGTGC10.6622516556291391No Hit
ATTCTGTATTTTCAAAGCAAACTGGGGAGGCTGTCTCTTATACACATCTG10.6622516556291391No Hit
ACCCATGGGATAATTAAGCTTACTGGGAATTCTAGTCAGAGAAATAATGC10.6622516556291391No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.6622516556291391No Hit
GATAAACATTGAATACTTCTGCAAATTTATTTTGGATTTCACATCCACTG10.6622516556291391No Hit
GTCACATCTTAGGTGGATGGCAGCAGGCAGAGAGAGAGAGCTTGTGTAGG10.6622516556291391No Hit
GACTAAACATGCTGACTTTCTTCAAATACACGAGAGACTTCTACAAGAAG10.6622516556291391No Hit
ATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCGTTGAGCAGTGGTTT10.6622516556291391No Hit
ATCCTGGACACCGCGGGCCAGGAAGAGTTCGGGGCCATGAGAGAGCAGTA10.6622516556291391No Hit
ACTGTGCCCGGCCGTGTTTTTTTGTTTTGTTTTTGTTTGTTTGTTTTTTA10.6622516556291391No Hit
GAAATATCCCCCGGCCGGGGATGCAATGCGGCCTCAATGAGTAGACCACT10.6622516556291391No Hit
ACTATGTGCACTGTTCTGGCTGTGTCGAGGGTATGAAAGTATATAAAAAT10.6622516556291391No Hit
CACTAGGGTAGATAAGAGTTAAATAAAATGGTGAAATGAAGTGGTTACTA10.6622516556291391No Hit
CATTGATATTGATCCTTTACTGTATAGTGAAGCTGCAACAGTCATCTCAG10.6622516556291391No Hit
GTCCAAAGTCTCATCAGAGACAAGACAAGCCCCTTCAGCCTATGAGACTG10.6622516556291391No Hit
AAAGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTCTGTC10.6622516556291391Clontech Universal Primer Mix Long (96% over 26bp)
CTTCACATCAGTGGGATTGAATTCAGAAAAAGAACATACTACTAAAAGTA10.6622516556291391No Hit
GATTTGGGAACATTTGACTAATAAATTTTTGAAATAATTTTTTTCTATTT10.6622516556291391No Hit
GTGTGTGTGTGTGTGTGTGTGTGCACGTGTGTGTGGCTAAATTAAGTCAT10.6622516556291391No Hit
GGCCTTCTGTTTAATCTTTTTTTTTCATTGTTTCACAGACAGGGTTTCCC10.6622516556291391No Hit
CATTTTTGGGTGGGTTGTAGATCATATCACCTTACCGCTGTCTCTTATAC10.6622516556291391No Hit
GTATCAACGCAGAGTACATGGGTACCTGGTTGATCCTGCCAGTAGCATAT10.6622516556291391No Hit
CACCTGAAGCAACCCAATTAGAATCTGAACAATTGCAAGCATTGCTATTG10.6622516556291391No Hit
TTCATGCTCTTAGAACCAGCTCCCAAGGCTGTATCTCCATTTTGAGTTCT10.6622516556291391No Hit
CGGGGGGGGGGGGCGGGCCCGGGCCCCGGCGCCCCACCACACCCCCCCCC10.6622516556291391No Hit
ATGATGTAATGAAAAATTGTACCATGAATTAGGAGCATAGTTTTTTCCAT10.6622516556291391No Hit
GGTTACTTGATCTAGGCTACCCATGAACCACAAAGTCTCTGGCTGTAGAA10.6622516556291391No Hit
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC10.6622516556291391Clontech Universal Primer Mix Long (96% over 25bp)
CTACCTATAAAGCTTCCTGTCCTGTAATAGCAGGGGACCTCAGTTCAGCT10.6622516556291391No Hit
GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGT10.6622516556291391No Hit
GAATTGTACCCTTTATCTTAGCAAGTTATACCACTATTCACCTACAAAAC10.6622516556291391No Hit
ATCATGCTCTTAGAACCAGCTCCCAAGGCTGTATCTCCATTTTGAGTTCT10.6622516556291391No Hit
CCAGAGGCCTCACCGCCTGCCCCTGAGCCTTCCAGTCCCAACGCCGCGGT10.6622516556291391No Hit
CCTTTAGACTGAGACATTCAAACAGAAAACTGGGTTCTAAAGCATATGTG10.6622516556291391No Hit
GGGTGAGAGCAGAGGGGATCGTGAGATCAAGAGTAATTTTTTTTAAAGGC10.6622516556291391No Hit
GCACTAGACACAGTGATGTGCTTTCCAGCACAGCATCTTACACTGCCCCC10.6622516556291391No Hit
CTATAATCAGATCTCCTTGCATTCTTCTGTTGGAAATATGCCCTAGAGGC10.6622516556291391No Hit
CTGAGGATCTATTGTATTTCTGTGGGATTGGTTGTAATGTCACCTTTGTC10.6622516556291391No Hit
AGGTAACTTTAGCAAATATAAAATGTGTATGTTTTGAAGCTATTAATGGT10.6622516556291391No Hit
GTTTTCGCCCAGTTCATCCCGAGGTTTACCTCTGCAAAAGAGGTAGTCCA10.6622516556291391No Hit
GTCGCGGGCGTCGTCCAGCGTCCAGTTACCGAACAGCTCTATCTGAATTT10.6622516556291391No Hit
AGTCCATTCAGTGATTCCATTCGTTTCCATTCCATGATGATTCCATTCCT10.6622516556291391No Hit
CGATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATG10.6622516556291391No Hit
GCTCCAAGAGGCTGTGTATAAAGCCGTAAATGATCAAAACAGCTCAGGAT10.6622516556291391No Hit
ACCAGGCCGTGGTGCAGGGCCTGGGCTGCCGCAGCCTGCGCGTGACCGAT10.6622516556291391No Hit
CACACGCCCTGGCCGCCGCGATCGCGACCATGCAGGTCTACCGCGACGAG10.6622516556291391No Hit
CTGCCGTATCGTTCCGCCTGGGCGGGATTCTGACTTAGAGGCGTTCAGTC10.6622516556291391No Hit
CATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCGGAGGTTCGA10.6622516556291391No Hit
CATTTACCTTGCTGTTGTTGCCCTTGACTGAATTAAAACAAACAAAATGA10.6622516556291391No Hit
ATATAGAGGGAGTAAGGGCATGAGAGGCTCCACTGCAGTTACCTTCACTC10.6622516556291391No Hit
CGCCACTACATCCCTTCTGTTTCTCTTCCCTATATCCTATCTTTTCTATT10.6622516556291391No Hit
AGCTGGCGCAGTTTCCGGGCCTGTTCGACCGCGAGCGGCTGGTGTCGACG10.6622516556291391No Hit
GGATTTGTCTACAGGGGGCTTTGTGACATATCTTTGCACTGATCACCCAG10.6622516556291391No Hit
GGGCCCGATCATGGCCCCAGTCCGCACAGAGCGCCCGGCCCTGGCCGCCC10.6622516556291391No Hit
GCTCTGAGTGGTGTGATGATAGCTCACTGCAGCCTTGAACTCACGAGCTC10.6622516556291391No Hit
GGCACACTGCAGGCCACTGACTGGAAGAACAACGCAGAGTTTGGCTGGGA10.6622516556291391No Hit
CATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGCTGTC10.6622516556291391No Hit
TGTAATAACAGAAGAGAAAAAAGACATTACAGGCGTATCTCACTTTATTG10.6622516556291391No Hit
GATGTATAGATTGATTAGTTTCAGTGTACAGAAAAAGAAGAGGCAAGGAG10.6622516556291391No Hit
GGTTAGGGGTTTGAGACTGGCCTGGCCAACATGAGGAAACCCTATCTCTA10.6622516556291391No Hit
GCACATGCCACTTGATACAATCCAAACTTTGAAATGTTTGACTTCTCAGT10.6622516556291391No Hit
GCCAGGAGGTTGAGGCAGCAGTGAGCTGTGATCATGACACTGCACTCCAG10.6622516556291391No Hit
AAACACCTATTCCCCAAAAACCTATTGAAATTGAAAAAAAATTTTAAAAA10.6622516556291391No Hit
GCACAACTGCTCTGGGCTGGATGACAACAGCTGTTCAGGTATAGCAAACT10.6622516556291391No Hit
CACCTGAAGCAACCCAATTAGCATCTGAACAATTGCAAGCATTGCTTTTG10.6622516556291391No Hit
GTTATTACTAGTTCCTCAACAAGGAAGCAAGTAAGTGCAAAATCCAGTGG10.6622516556291391No Hit
GAGATATGACTGAGAAACACTAGGAGAATCAATCTCCTTCTCTACCCACT10.6622516556291391No Hit
ACCCTCTTTTTGTGATATTTGCAGGTGGAGATTTCAAGCGCTTTTAGGCG10.6622516556291391No Hit
CTTACATGTAATGTCCAGAATTTCTCTGAATCTCAGTGACCACTTCCTGC10.6622516556291391No Hit
GTGCGCATTAATCACCCAGAGTTGAATCTTTCTTTTGAAGGACCAGTTTT10.6622516556291391No Hit
GAAGAAAACCTAGGCAATACTATTCAGAATAGAGGCATGGGCAAGGACTT10.6622516556291391No Hit
CGGGAACAGGGTCTTGCGGGCTTCACTGGCGCTGATGGACATGCTGGCCT10.6622516556291391No Hit
GTTTAAAATAATGGGTTATAACAGTATTTGCAAGCCTCATGGTAACCTCT10.6622516556291391No Hit
CTTTTATACATCGGTCCCTCCCTAGTCTCTGTTCCCAATGCCGTTCATCC10.6622516556291391No Hit
GAATCCTCCCTAACTCATTTTATGACGCCAGTATCATCCTGATACCCAAG10.6622516556291391No Hit
GTGAAGTCCTGTTTTGAATGCCAAACCCACCATTCACTGGTGCTGACTAC10.6622516556291391No Hit
GACTCTCCTTCTTTGGGCCACGGAATTAACCCGAGCAGGCATGGAGGCCT10.6622516556291391No Hit
GTAAAGTACATTAACAACAAGATGAACAGGTTCTTGAACATCTTATACTT10.6622516556291391No Hit
GAGTACTTTTTTTTTTTTTTTTTTTAAGTTCAGGGTACATTTGCAGGTTT10.6622516556291391No Hit
CATTAGGATCAGGGCTCACATTCCCAGTTTCCCTTGTAGCCAGATGTACA10.6622516556291391No Hit
GTAAAGTACATTAGCAACAAGATGAACAGGTTCTTGAACATCTTATACTT10.6622516556291391No Hit
TGTTGAAACAATTGTATTCATAAGCTCAATAAGGAAATGAGGGGGAAAAA10.6622516556291391No Hit

[WARN]Adapter Content

Adapter graph