FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003647561

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003647561
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29
Sequences flagged as poor quality0
Sequence length146
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCCCGCCTAGGAATTTATGATGAGCGTCCTGTCAAAGCGGTATTACAC26.896551724137931No Hit
ACCCTCGACGGCGGCGCTTCGGCGCCGCCGTCATCGTGTCCGCGGGGCGC26.896551724137931No Hit
GCAGTCATCCGACATCGCTGGGATCTCTCTGGGACCCATATCGCCACTAA26.896551724137931No Hit
CAACGGCGATTAAAAAACAAAACAGCGGAACTCGAAAAAGCCTTAAAAGG26.896551724137931No Hit
GGAAAAAAGTTTCATTTTACGTCAATTTAGCAGAGGAAATGACGAATCGT13.4482758620689653No Hit
GGAATTATCGGAACGGCTGTAGGTTTGGCGATAAATGGTTTTCGGCCCGT13.4482758620689653No Hit
GCAAAGCACTTCTTCTCCGAGTTCATTTTGAATGAGCGCTTTGCGCGAAA13.4482758620689653No Hit
CGCTAAACGGAGTCACGCTTCCGGTTCGTGTGATGAAGGCGCTCGGCGTA13.4482758620689653No Hit
CGTGCGGCATTCTTGGCGACTTTCCAGGGTCCCGGCCCGGCAGCACGAGA13.4482758620689653No Hit
GCATGAGGGACACCCGTTGACCTTCATTTCCGGTGGTTCGGCCACCTCTG13.4482758620689653No Hit
TGGGAAGGAGCATCGTCCCGTGGTGATTCACCGTGGCGTTGTCTCGACGA13.4482758620689653No Hit
GCATGGGCCTCGTCAATACGACGTTTATCGTTTCAATTCAAAACAGCGTA13.4482758620689653No Hit
GGGGATGACTTATCGACTGGCTTCAGAGGCGACAAAGCGACTCGCCGGGA13.4482758620689653No Hit
GTACAGCCTCTGTCATCTTTTGCGCTTCTTTCAGCGTACGGGCAAGCGGT13.4482758620689653No Hit
GTATGAAGCATTCCGTTTCATACGCTGGCACGACTATTCCGTCGATATTG13.4482758620689653No Hit
GACCTTGACAATACGCTATTTGATCACGAAAAGGCTTTTGAAAAAGCAAT13.4482758620689653No Hit
CGTCAGTTACGAGGCGGTCCAGCAAATTGAAAATGTGCCGGCGCATCCAG13.4482758620689653No Hit
GCATCAGTCGACGATTCCTATTGAATAAATAGGGTTTGCTGAACAACTCG13.4482758620689653No Hit
CTGCTGGCGTTGGGAAGCATTCATCATCTCCTGCCAGAGATAGGGCCGAC13.4482758620689653No Hit
CTTGCCGTCGGCCGCGAGGCATGCGAGCTTCGCGCTCGTGCCGGTGCCGC13.4482758620689653No Hit
CCTTTTCGATGACCGATTTCCTGATACGTTACACCAAAAACGGTTTCGGG13.4482758620689653No Hit
GAACTGTATGACGCTTGGGCCTCCGGAAACGTCAAACGGGCACAAAATTT13.4482758620689653No Hit
CAACGGCGATTAAAAAACAAAACAGCGGAACTCGAAAAATCATAAAAAGG13.4482758620689653No Hit
TGGATATATCGTTGGGCTTGCCGGACGGCATCATGGGCCCGGCGTTGCGG13.4482758620689653No Hit
CTGTTACGGAATTATTGCGCAAACGACATGACTTTACCGTCGTAGAAGAA13.4482758620689653No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)