FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003647881

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003647881
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56
Sequences flagged as poor quality0
Sequence length146
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGCGCAGGGTCTTCGCAGGCCCTCGCAGGCGCAGCGGGCTTGTCTTTTC35.357142857142857No Hit
GTACGGCGACATGTTCGTCTTCGGCGTGATCGACCCCGCGAAGGTCGTTC35.357142857142857No Hit
CCACCCGCGCGCACTACGGGAAGCGGCTGGCGGCGCTGATCGGCTGCGCC35.357142857142857No Hit
GAATTATGGTGAGTACATTGGCACTCACTCCAATTTTACCCATTCAGACT23.571428571428571No Hit
ATTCCAGTCTGGGTGACACGGTGAGACTTTGTCTCAAAAAAAAGAAAAGA23.571428571428571No Hit
ATGCATGTCTAAGTACGCACGGCCGGTACAGTGAAACTGCGAATGGCTCA23.571428571428571No Hit
TCAAATTACAGGCCAATTTCTTCGAAATGGACATCCCCAAAATTGACATC23.571428571428571No Hit
ATCACCAGTACATCAAGCCGACCGGCGAAAAGCGCCAAGGCGTGGCACAG11.7857142857142856No Hit
AGTTACCACAGGGATAACTGGCTTGTGGCGGCCAAGCGTTCATAGCGACG11.7857142857142856No Hit
CAGTACGTCTTTCAAGCAGATTTTCTATTTCAGAACCAGAAAGCCCTGGT11.7857142857142856No Hit
GATGGACCCGGCCGCCGACGTCTGCCAGGTCGCGCTGGTCGAACGCCATC11.7857142857142856No Hit
GTCCTGGCTCCGCGACCACCTCGACACCACGGCCTCCGTGCCCCAGATCG11.7857142857142856No Hit
GTCCACCACGCCACGTGCACGCGCCCCCGCGCGTCCACCGCGAGCGCCGG11.7857142857142856No Hit
AGTCATATGTGGCCAGCCCGCAGGTGGAAGCATTGGAACCCACCTGTCTC11.7857142857142856No Hit
GGTGGCCGGCGGCATGGTCGCGTCGTTCCGCGCCTCCATCGGCACCGAGG11.7857142857142856No Hit
GAGCAGACGGGCCGCCTGGGCAGCGTCGGCACGCAGCGGCACGTGCGCCC11.7857142857142856No Hit
CCCAGCGCTGGCAGAAGCCGCCCCCGGCCTGGACCTATCTCCCCTTCGGC11.7857142857142856No Hit
ATGTTCTTCTTCTCGGACCTGGCTGTGCGGCGTGAAATCGCCAGGCTGCT11.7857142857142856No Hit
ACCTTGCTGAACACCTCATTCTCTACTCCTTCTCTCCTCTCTGCAGCCAA11.7857142857142856No Hit
CCCTCGCAGGTCTCGCAGCGCCCCTTGGCGACGTTGAACGAGAACCGTCC11.7857142857142856No Hit
GTTCCCATCTAGTTAACAGGAAACAAAGACACCCCAGAGCTGTGCAACTC11.7857142857142856No Hit
GCCATGGCGGCACCGGCCAGCATCGGGTTGAGCAGGCCCGTGGGCCCCCC11.7857142857142856No Hit
GTTTACAAGTGAGGAAACTAAGTTTATATAAGTGTCACGAAACTTGCTTC11.7857142857142856No Hit
TGGCAACAGAGGAGTGAGGAGTGCTGCTGTAGATGACAACCTCCATTCTA11.7857142857142856No Hit
GCACGATGAGCAGGAGCGCGCGCCACCCGCCGAGCTTGCCGGTGGCGTGC11.7857142857142856No Hit
TCTTAGAGCCCAGTGACCCTCCAAGGGTCAGAAGCAGGGTCATCTGAGTA11.7857142857142856No Hit
CTCTTTTTGTAGAATCTGCAAGTGGATATTTGGAAAGCTTTGAAGGTTTC11.7857142857142856No Hit
AAAGAATATTGAGGCGCCATTGGCGTGAAGGTAGCGGATGATTCAGCCAT11.7857142857142856No Hit
CCATTTGACTTCTCCCTGCAGATTTCTCCCCATATTACACGCAGTATCAT11.7857142857142856No Hit
AATTAAAACAAAGCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGTG11.7857142857142856No Hit
GCCAGGGGCTGGCCGGTGCCGGGCACCGATTCGTCGAAGAGCGCGATGGC11.7857142857142856No Hit
CCCGTCCAGGGCGTCCGCGCATCGCCCTCGACCCCCACGAGAGCCACNCC11.7857142857142856No Hit
CAGTAGTCACTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGTATGGTT11.7857142857142856No Hit
CGCTCGCCCTGCGCGGGGGCTTGCGGCTGGCCCTGGGCCTTACGGCGATT11.7857142857142856No Hit
CCCTGCGCCAGAAGAGCGCGAGCTTGGTCCAGCGTCTGCACGCCCCCGTT11.7857142857142856No Hit
CCTCATGGACACACCCTCCAGTTATGAGGCTGCCATGGAACTTTTCAGCC11.7857142857142856No Hit
GCTTTGATAATAGGGCCTAAAAACCCAAGCCAGACCGGTTTTTCTATAGT11.7857142857142856No Hit
GTATTGCCACGCACGAACCGGTCATACTGGTCGGTGATCCAGGAACGGTC11.7857142857142856No Hit
GTTCAGGATCAGCCTCAAGGCCGCGGGCCGTTCGGCGACCTCGGTCGGCA11.7857142857142856No Hit
GCCGTGCCGGGCGGACGATTTCGCCGGCTTGAGGGGCCCCGCCCGGGGGT11.7857142857142856No Hit
GCATCCAGCATGGGAGGATATGGAGAAATAGGAACACTTTTACACTGTTG11.7857142857142856No Hit
GGGTGGATTGGCAGGTGCGTGAGGAAATAGTCGCGGTCCCCGTTGGTGAG11.7857142857142856No Hit
CCCAAGGCGCTATGCCGCATAACGACGATGAGGGCGAGGAAGAAGAGGAT11.7857142857142856No Hit
GGCCAGAGCATCCCCCACCACCACCCAGAAAAACACAAAAAAAAACGGAG11.7857142857142856No Hit
CCGACAAGGAACCCAGCCAGCACCGCGGGCGACAGCAGCGCGCCCTGGCG11.7857142857142856No Hit
ATCCACTGGAGGGTGTGAGACCCGGCCTCGCTCTGGTTGTAGTAGCCGCG11.7857142857142856No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)