FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003647882

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003647882
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56
Sequences flagged as poor quality0
Sequence length146
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCGCCCGGAGGCGCCCTTTCCCATGTTCCCGGGTCGGAAGGCGATCAG35.357142857142857No Hit
GGCCGACGCTCCAGGTGATGGGATCCTGCAGGTTCGCCTCGAGCACGAGG35.357142857142857No Hit
GAGAGTATACTTCTTGTCTGAGCTGTAAGTGATCAAGTGAGTCTGAATGG23.571428571428571No Hit
GAGAAGGCCGGACGGACTGATGGAAGCCAAACCACACTTCTCGGCCCCCG23.571428571428571No Hit
GTGTAGACGGACATGAAGGCCCACAGGAGGGCCGCGACGGCCGCGCCGCC23.571428571428571No Hit
CTCTCACTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTG23.571428571428571No Hit
TAGGAGAGGAGCGAGCGACCAAAGGAACCATAACTGATTTAATGAGCCAT23.571428571428571No Hit
GAACTCATCATTTTCTATGGCTGCATAGTATTCCATGGTGTATATGTGCC11.7857142857142856No Hit
GGCGCAGGCCGACCTGGGTCTGGCCATGGGCACCGACACCGACGTGGCCA11.7857142857142856No Hit
CGCAAAAGCGCCTGCTGCACCGCCTGCCGAACCGGTCAGTCCGGCTGCGT11.7857142857142856No Hit
CCGGCGTGCTGCACGCCACCGGCAAGCTCGGCGGGTGGCGCGCGCTCCTG11.7857142857142856No Hit
CCGCCGACGTGACGACGACTGCGCGCGCCCCCTCGACGTGCGCGGGGCTG11.7857142857142856No Hit
GGTTATGAGGATCTCTGTGGAATGCTGCTGAGAGGTCAGTTTGTTAGCTA11.7857142857142856No Hit
GCCCCCGCTCGCGCCCGTGGGGGGCGACCCGGTGCCCTGGGCCGGGGTGA11.7857142857142856No Hit
TGACTGCCCTGGGCCATGCGGACGTCTTCGCGCCCGCCGACCTCGCGTTG11.7857142857142856No Hit
GTGAGACCCGGCTGATTCCCATACATGAATCCATTCATGGAGTGCATTTT11.7857142857142856No Hit
GTGTAGACGGACATGAAGGCCCACAGGAGGGNNNNGNCGGCCGCGCCGCC11.7857142857142856No Hit
CTCCGCGCGGGCGCGTTCGTCACGCGGCGCTACCGCAACCGGCGCGTCGG11.7857142857142856No Hit
AGCGAACGGGCCGTCTCGCTCCCCGGTTCGGCGTGGTACATCGCCAGCAG11.7857142857142856No Hit
GGGCAATCCTCTTCTTCCTCGCCCTCATCGTCGTTATGCGGCATAGCGCC11.7857142857142856No Hit
GAAAGCTTCATCTCCGTTAGTTGAATACACACATCACAAACAAGTTTCTG11.7857142857142856No Hit
AGAAAGATCTGACTCTCCAAACTGCATCTGAGATTGCCACTTTAAACAGA11.7857142857142856No Hit
GTTTAGTGTAATGCAAGAAGATGGACCTAGGTTCTAATTTCAGATTTGCC11.7857142857142856No Hit
CCCTCGGAGGAAAGCCAGTACCTGCGCGACTACTACCGCAGGCTCCAGGC11.7857142857142856No Hit
GCCCCCCGCAGCGCCACGAACGCGAGCACCGGGAGCATTCCCAGCGCGTA11.7857142857142856No Hit
CAGCCTGGCGATTTCACGCCGCACAGCCAGGTCCGAGAAGAAGAACATCT11.7857142857142856No Hit
ACATTCACCGCCACAACCTGCATGGCGTGAATGCGCGCATTCCGCTGGGC11.7857142857142856No Hit
GCCCAAAATGAAGGTGCACAGAACTCTGCAACGTTTAGTGCCAGTAAGCT11.7857142857142856No Hit
TTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGG11.7857142857142856No Hit
CCTCGTGGCCGATTGCGTCAAGGCCATGCAGGACGCGACCGACGCCGAGA11.7857142857142856No Hit
CGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAAT11.7857142857142856No Hit
TGCTGGTCCCTTCTTAGAGTGACAATTGGCTTTCCTAAGCATTCCGGAAC11.7857142857142856No Hit
ATTAATTAACCACTCATTCATCGACCTCCCCACCCCATCCAACATCTCCG11.7857142857142856No Hit
GCCGACGTGCTGGTCGGCATCGGCCTGCGCTTCGACGACCGGGTGACGGG11.7857142857142856No Hit
GACGATCTGCTGCTCTCCGTCCTTGGTCAGGACGCGGCAGACGCGGAGCT11.7857142857142856No Hit
GTGATGACCTCCTTCCCGTTCAAGGGCGCGGCGTGGGGCCGGCGCGGCGC11.7857142857142856No Hit
CTGTCTCAGGCTTTACAAGCGATGAGAGACTCATCAGAGCCCTGGGCACT11.7857142857142856No Hit
CCTCTGTGCACCTTCATGCCTTGTGAATGGTACCTGGGGCTTGCTTCTTT11.7857142857142856No Hit
GGCCCTTGTTGGCTCCGCCCAGCTGTGCGACCGTTCCTGGATCACCGACC11.7857142857142856No Hit
TGCCTGGTGTCCTGCTCATTTGGCTTTAGTCCCAGAGTTGCACAGCTCTG11.7857142857142856No Hit
ATATTAGACAGATCAACGAGACAGAAAATTAATAAGGATATTCAAGACTT11.7857142857142856No Hit
TCCTGGTGCTGGGCTTCGCGGTGCACAACGTCACCGAAGGGATTGGTATC11.7857142857142856No Hit
GTGGGTTCCAATGCTTCCACCTGCGGGCTGGCCACATATGACTCTGTCTC11.7857142857142856No Hit
GCTAGTATCCCATGTACTCTGTATCAACGCAGAGTACATGGGATACTAGC11.7857142857142856No Hit
CACATCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCA11.7857142857142856No Hit
ATGCAGGCCTTGTCGGTGCCGACGACGATCATGTGGTGGCTGTCATGCGC11.7857142857142856No Hit
AGGTGGTGGTGGCCCGCTCGGTCGACGCCGGGCGGACGTGGGGGGCGCCC11.7857142857142856No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)