FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003648112

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003648112
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35
Sequences flagged as poor quality0
Sequence length146
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGACTACTCCATGCGCGTGGACCTGCGGGCTGGGGACGAGGCTGTGTTCG38.571428571428571No Hit
CTTCAACATCCTGCCAGCCCCACACAGCTACAGCTTTCTTGCTCCCTTCA25.714285714285714No Hit
GGGGAGGCAGAGGGGACACCATGGCTGGGAGAAGCCCGCCTCTATGTGGC25.714285714285714No Hit
CTGTCACCACGGCTCCCAGAGTGTTCTGCACGGCCTCGCCCACCTTCCGA25.714285714285714No Hit
GCGCTGTACATCGGCTGGGCGGCCACCGCGCTGCTCATGGTAGGCGGCTG25.714285714285714No Hit
GGTGCAGATCACAGAGGAGAAGCCACTGTTGCCAGGACAGACGCCTGAGG12.857142857142857No Hit
ATCCACCACCACCCAAAAAATCCCAACCAACAACCAGCGAGCGGAGTAAC12.857142857142857No Hit
CATTAAGGAGAAGCTGTGCTACGTCGCCCTGGACTTCGAGCAAGAGATGG12.857142857142857No Hit
GGACATCTAAGGGCATCACAGACCTGTTATTGCTCAATCTCGGGTGGCTG12.857142857142857No Hit
GCCATGGGGTCCGCAGCGTTGGAGATCCTGGGCCTGGTGCTGTGCCTGGT12.857142857142857No Hit
ACGTCCGGCCTGGTGGTGGGTTCGAGCCCAACTTCATGCTCTTCGAGAAG12.857142857142857No Hit
TATCATATCCAAGATAGTGTAGGACTCGTCGCATTGGATGACGATGCCTA12.857142857142857No Hit
CCCTTCACAGGCCACAATGATGTGTCTCTCCTTCGGGCTGGTCCGGTATG12.857142857142857No Hit
CCCGACACCTGTCCTCATCTGGAACAAGGTAAAAAGGGGTCACTATGGAG12.857142857142857No Hit
GTGCGTCCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGATC12.857142857142857No Hit
CATCTGGAATGTCACTGGTGCCCAGGTGTACTTGAGCTGTGAGGTCATCG12.857142857142857No Hit
GGTCCCAATGGGTCCAAAGGGGTCAAAGCGAGCTCCTGGGGGCACAGCGC12.857142857142857No Hit
CCGCAGTCCTCACACTTGTAACACTTCATGTGGAAGTTCTTGTCCAGGGC12.857142857142857No Hit
CTCCAGATTACTTCCATTTCCGCCCAAGCTGCTCACAGTATACGGGCGTC12.857142857142857No Hit
GGTGGAGAGCACCAAGACAGACAGCCGGGATAAACCCCTGAAGGATGTGA12.857142857142857No Hit
GCTTACGGTAGGTCCGAATGGCACAAAGCTTGTTCCGTTAGCTGGCATAA12.857142857142857No Hit
GCTTTATAGCCCATCCTCATGCAAAGAACATGTCACTCTGCTGCCCTCAT12.857142857142857No Hit
TCACTGTGTGGGACGTGGGTGGCCAGGACAAGATCCGGCCCCTGTGGCGC12.857142857142857No Hit
GGCACATGCAGTGCAAAGTGTACGACTCGGTGCTGGCTCTGAGCACCGAG12.857142857142857No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA12.857142857142857No Hit
CCTGTGGACCATCTGGGGACTGAGCACTGCTATGACTCCAGTGCCCCCCC12.857142857142857No Hit
GTATCAACGCAGAGTACATGGGGAGATTCTCCCCAGACGCCGAGGATGGC12.857142857142857No Hit
GAGTGAGACTCACCTGCTCCTCTGGCCCCTGGTCCTGTCCTGTTCTCCAG12.857142857142857No Hit
CTCGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGG12.857142857142857No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)