FastQCFastQC Report
Tue 10 May 2022
EGAF00003648128

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003648128
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences299508
Sequences flagged as poor quality0
Sequence length146
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCTACACCTACCTCTCTCTGGGCTTCTATTTCGACCGCGATGATGTGG4270.14256714344858903No Hit
CCCTATTACTTTGCAAGGGGCCCTTCAGAAGTCGCTGGGCTCAGAAGGCT3610.12053100418018883No Hit
GAACAGATCCGGGGACTCTCTTCCAGCCTCCGACCGCCCTCCGATTTCCT3570.11919548058816459No Hit
GGCTTAGGCAGAAGCCCTATTACTTTGCAAGGGGCCCTTCAGAAGTCGCT3270.1091790536479827No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)