FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003648335

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003648335
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30
Sequences flagged as poor quality0
Sequence length146
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTACGCGTGCTAAAACGAAATACCAAAGCCAAAAACAGAGAGCCGAAG310.0No Hit
CGTCTATACCGGATGGGAACAGAACGGCCCGCGTGTGTCCTTAACGGACA310.0No Hit
AGACTGCCCTGGTTCTAAGGGGACAAAGGCACTTTCCGTATCACGTGGCT310.0No Hit
ACATTTGGTTCCATTGTTCTTCTTTTTCTTTACCCCTGACAACGACGGTT26.666666666666667No Hit
CTTGTGGATCGACACGTTCTAAAAATTCGGGAATCGTCCCTCGATAATCG26.666666666666667No Hit
CCTCCATTTTGTCGCCAAACCCTAACGCGGTTCGCTTTTTTTTGATCCCT26.666666666666667No Hit
GTGAATAAGCTGAGCGAGATCTTCAATTGAATAAATGTCATGGTGCGGCG26.666666666666667No Hit
GCTGTCGAGTGCTGCCGAATCGCTGCCGTTTACATCAATGACCGGATGAA26.666666666666667No Hit
GTTTCTAAGTCTTGCGGCTTAAGCTGTTCTAAAACGGGGACAACCTCAAA13.3333333333333335No Hit
TTCTTGCCCTCCATAAACGGCCAATGTCCGTATGCGGGAAAATTTCCCGA13.3333333333333335No Hit
AATTTATGATGTGATCGAAAAAAGTGCGCCGCTCATTCGGTGGTTTTTTT13.3333333333333335No Hit
TATTCGTTCTTGGAAATCTTTTTTACAGAGGGCCGCGGAGATCACTGTAT13.3333333333333335No Hit
GTCAATGGGGTGCTCTGGCCGTGGATTTTCTTGCTGATGCGCAAAGTCCG13.3333333333333335No Hit
GGTGTTGACTTTCCATTGTTTTTTGAAAACGGAGACGGCGATACTGTTGA13.3333333333333335No Hit
GTGAATAAGCTGAGCGAGATCTTCAATTGAATTAATGTCATGGTGCGGCG13.3333333333333335No Hit
GTGCTGCAGGAAGACAAATTATGACTACGGAACCAAAGTTTATTCCTAAT13.3333333333333335No Hit
AATATGGGCAGATCTCTCGCGCTTTATCTAGAGAAATTTGCTGTGCTTCA13.3333333333333335No Hit
GCGCCATTTTTTACATCCGACATCTTCGGTCAGCGAACAGCAACAAATTG13.3333333333333335No Hit
GGATCATGTCATCGACACGAATTTAAATGGTGTCTAGCATTGTTTAAAGG13.3333333333333335No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)