FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003648337

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003648337
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Sequences flagged as poor quality0
Sequence length146
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATATCCAGAGTTGAAAGAGCCTGCCGAAGCAAATAAAATGCTGATCATT15.88235294117647No Hit
CAGTAACGGTTATAGGCTTCCATCTCTTCATTTGAATAGTTTTCTACGTC15.88235294117647No Hit
ATCGGGCTCTTTATCAGTGCGGCTTATGCCGCAGCGGGTTTTCCTGTAAC15.88235294117647No Hit
TGATTCTTCAATTGACGAATTTGCATACGAAGAAGACGGGGTGAAGGTCA15.88235294117647No Hit
GCTTTTGATGGCGCTTGTGCTTGGGAAAGTGTTCGGGTCGTTGTTTCACT15.88235294117647No Hit
CTTGTGGATCGACACGTTCTAAAAATTCGGGAATCGTCCCTCGATAATCG15.88235294117647No Hit
ATCGGGCTCTTTATCAGTGCGGCTTATGCCGCAGCGGGTTTTCCGGTAAC15.88235294117647No Hit
TAAGAGAACCGTTCAACACATCCCGTTTGGCGCAGGCCGCGGCCATTGCT15.88235294117647No Hit
CATTTTCTTCTTTAAAAAGGATTCCGCTAGCCTCGCCGTGCAAGTCTATC15.88235294117647No Hit
GCACATTCACACGTATTTTACCGAATGATTGCACACAATCACTATGAAAC15.88235294117647No Hit
CGATGACCCTATAGGATCAAGGCTTGGAAGACCTCCATTTTGTCGCCAAA15.88235294117647No Hit
GGGCCCTTGCGGTCATCGGTTTTTTTGAATTGCTTTATATGAGAAAACTC15.88235294117647No Hit
ATTCTGGTTTATTATCATCATTTTTTTGGCAACAATGATTGTTTTTACGA15.88235294117647No Hit
AGAGCGTACCGAGCGCCAGCCGGATGTCGATGTTCAAGCATTGCAAAAAC15.88235294117647No Hit
GTTGTCGGGGCAACAAGCGAAATAAAAACAAGACCTTTTTGTTCCGTTCG15.88235294117647No Hit
CTTTAGTGCTTCATCAACCGTTTGTACAGGTTCAATATGACCAGGAACGA15.88235294117647No Hit
CCCCTGGATCGAGCGTTCCAGTATGTCCAATTTTTTTAACGCCTGTTTGT15.88235294117647No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)