FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003648590

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003648590
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2618
Sequences flagged as poor quality0
Sequence length146
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCAAGTCCCAGCGAACCCGCGTGCAACCTGTCCCGACTCTAGCCGCCT170.6493506493506493No Hit
GTCCCGACTCTAGCCGCCTCTTCAGCTCGCCATGGATCCCAACTGCTCCT130.4965622612681436No Hit
CACTTGGCACAGCCCACAGGGCAGCAGGAGCAGCAGCTTTTCTTGCAGGA130.4965622612681436No Hit
CTTTACATCTGGGAGCGGGGCTGTCCCAGCATCAGGCGCAGCAGCTGCAC120.4583651642475172No Hit
GGGTCAGGGTTGTACATAAAAAATCCAGGTTTGTGGAAGTCGCGTTCTTT120.4583651642475172No Hit
GGTCAGGGTTGTACATAAAAAATCCAGGTTTGTGGAAGTCGCGTTCTTTA110.42016806722689076No Hit
CGTGCAACCTGTCCCGACTCTAGCCGCCTCTTCAGCTCGCCATGGATCCC110.42016806722689076No Hit
CGCCTCCTCCAAGTCCCAGCGAACCCGCGTGCAACCTGTCCCGACTCTAG100.38197097020626436No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT100.38197097020626436No Hit
GATCCCAACTGCTCCTGCGCCGCCGGTGACTCCTGCACCTGCGCCGGCTC90.3437738731856379No Hit
CTCCTGCACCTGCGCCGGCTCCTGCAAATGCAAAGAGTGCAAATGCACCT90.3437738731856379No Hit
GTCACGGTCAGGGTTGTACATAAAAAATCCAGGTTTGTGGAAGTCGCGTT90.3437738731856379No Hit
GTCCCAGCATCAGGCGCAGCAGCTGCACTTGTCCGACGCCCCTTTGCAGA90.3437738731856379No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA90.3437738731856379No Hit
GTCCCAGCGAACCCGCGTGCAACCTGTCCCGACTCTAGCCGCCTCTTCAG80.30557677616501144No Hit
GTTTTATTATCATTCACATTATTTCATAGAAAAAGGAATATAGCAAACGG80.30557677616501144No Hit
GTCAGGGTCAGGGTTGTACATAAAAAATCCAGGTTTGTGGAAGTCGCGTT80.30557677616501144No Hit
GTACATGGGACGCCTCCTCCAAGTCCCAGCGAACCCGCGTGCAACCTGTC80.30557677616501144No Hit
GGTTTGTGGAAGTCGCGTTCTTTACATCTGGGAGCGGGGCTGTCCCAGCA80.30557677616501144No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG80.30557677616501144No Hit
CCTGTGGGCTGTGCCAAGTGTGCCCAGGGCTGCATCTGCAAAGGGGCGTC70.267379679144385No Hit
GTATCAACGCAGAGTACATGGGACGCCTCCTCCAAGTCCCAGCGAACCCG70.267379679144385No Hit
GGAATATAGCAAACGGTCACGGTCAGGGTTGTACATAAAAAATCCAGGTT70.267379679144385No Hit
GGGTTGTACATAAAAAATCCAGGTTTGTGGAAGTCGCGTTCTTTACATCT70.267379679144385No Hit
GCCCACGGGGCAGCAGGAGCAGCAGCTCTTCTTGCAGGAGGTGCATTTGC60.2291825821237586No Hit
ATTTACATCTGAGAGCACAGCTGTCCTGGCATCAGGCACAGCAGCTGCAC60.2291825821237586No Hit
CATTATTTCATAGAAAAAGGAATATAGCAAACGGTCACGGTCAGGGTTGT60.2291825821237586No Hit
ATTTCATAGAAAAAGGAATATAGCAAACGGTCAGGGTCAGGGTTGTACAT60.2291825821237586No Hit
CCATGGATCCCAACTGCTCCTGCGCCGCCGGTGACTCCTGCACCTGCGCC60.2291825821237586No Hit
ATATAGCAAACGGTCAGGGTCAGGGTTGTACATAAAAAATCCAGGTTTGT60.2291825821237586No Hit
ATCCAGGTTTGTGGAAGTCGCGTTCTTTACATCTGGGAGCGGGGCTGTCC60.2291825821237586No Hit
TGGCGATTCGGCCCGACGAGCTCCGCTTTCGCTACAGCATGGTGGCCTAC50.19098548510313218No Hit
GCCTAGCAGTCGCTCCATTTATCGCTTGAGATCTCCAGCCTTACCGCGGC50.19098548510313218No Hit
GAGTGCAAATGCACCTCCTGCAAGAAAAGCTGCTGCTCCTGCTGCCCTGT50.19098548510313218No Hit
GCCCACAGGGCAGCAGGAGCAGCAGCTTTTCTTGCAGGAGGTGCATTTGC50.19098548510313218No Hit
GGTATCAACGCAGAGTACATGGGACGCCTCCTCCAAGTCCCAGCGAACCC50.19098548510313218No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG50.19098548510313218No Hit
CCACAGGGCAGCAGGAGCAGCAGCTTTTCTTGCAGGAGGTGCATTTGCAC50.19098548510313218No Hit
ATTTCATAGAAAAAGGAATATAGCAAACGGTCACGGTCAGGGTTGTACAT50.19098548510313218No Hit
TATCAACGCAGAGTACATGGGACGCCTCCTCCAAGTCCCAGCGAACCCGC50.19098548510313218No Hit
GGGCACACTTGGCACAGCCCACAGGGCAGCAGGAGCAGCAGCTTTTCTTG40.15278838808250572No Hit
GTACATGGGACTCTGGGCAGGATCCAACGTCGCTCCAGCTGCTCTTGACG40.15278838808250572No Hit
TGTGAGGATAAAGGGCTGATACAGGACTCGGCTCCGGGGGCAGGGCGAGG40.15278838808250572No Hit
ATGCTGAGCCCCACTTATAAGCAGCGTAATGAGGACTTCCGGAAACTGTT40.15278838808250572No Hit
GAATATAGCAAACGGTCAGGGTCAGGGTTGTACATAAAAAATCCAGGTTT40.15278838808250572No Hit
CGGAGCAGGTCTTACCTGCAAGGACAGGATGCTGATATCCGTGTTGAGGG40.15278838808250572No Hit
TCTGGGAGCGGGGCTGTCCCAGCATCAGGCGCAGCAGCTGCACTTGTCCG40.15278838808250572No Hit
TTATTAAAGGGCCCGTGCCGCAGAGTCAATATAAAAACACAAAGTCCCAT40.15278838808250572No Hit
CTGCTGCCCTGTGGGCTGTGCCAAGTGTGCCCAGGGCTGCATCTGCAAAG40.15278838808250572No Hit
GCTCCTGACTCACCGCTGTTCGCTCTCGCCGAGGAACAAGTCGGTCAGGA40.15278838808250572No Hit
GGATCCCAACTGCTCCTGCGCCGCCGGTGACTCCTGCACCTGCGCCGGCT40.15278838808250572No Hit
AACCTGTCCCGACTCTAGCCGCCTCTTCAGCTCGCCATGGATCCCAACTG40.15278838808250572No Hit
GGGTGGTGGGGTACACAAAAGCAGAAATCGCACTTCACACATTTAGGCCT40.15278838808250572No Hit
CTGCACCTCAATGGAAACGATGTGGTGTCCGGGTACCATGGCCAGGCCCA40.15278838808250572No Hit
ACTCTAGCCGCCTCTTCAGCTCGCCATGGATCCCAACTGCTCCTGCGCCG40.15278838808250572No Hit
GCCGGTGACTCCTGCACCTGCGCCGGCTCCTGCAAATGCAAAGAGTGCAA40.15278838808250572No Hit
GTACATGGGACCACGCCTCCTCCAAGTCCCAGCGAACCCGCGTGCAACCT40.15278838808250572No Hit
AAATGGACCCCAACTGCTCCTGCACCACTGGTGTCTCCTGCGCCTGCACC40.15278838808250572No Hit
TCTCCAGCCTTACCGCGGCTCGAAATGGACCCCAACTGCTCCTGCACCAC40.15278838808250572No Hit
CACTTGGCACAGCCCACGGGGCAGCAGGAGCAGCAGCTCTTCTTGCAGGA40.15278838808250572No Hit
CCTCCTCCAAGTCCCAGCGAACCCGCGTGCAACCTGTCCCGACTCTAGCC40.15278838808250572No Hit
TGCACCTCCTGCAAGAAAAGCTGCTGCTCCTGCTGCCCTGTGGGCTGTGC40.15278838808250572No Hit
TTCAGGTACTGGATCTCCTTGGCCAGGGAATCCGCCCTCTCTTTTAGAGC40.15278838808250572No Hit
CGGTCAGGGTCAGGGTTGTACATAAAAAATCCAGGTTTGTGGAAGTCGCG40.15278838808250572No Hit
GAATATAGCAAACGGTCACGGTCAGGGTTGTACATAAAAAATCCAGGTTT40.15278838808250572No Hit
GTATCAACGCAGAGTACATGGGACCACGCCTCCTCCAAGTCCCAGCGAAC40.15278838808250572No Hit
GGAATATAGCAAACGGTCAGGGTCAGGGTTGTACATAAAAAATCCAGGTT40.15278838808250572No Hit
CAGGCGCAGCAGCTGCACTTGTCCGACGCCCCTTTGCAGATGCAGCCCTG40.15278838808250572No Hit
TCCCAGTATCAGGCGCAGCAGCTGCACTTGTCCGACGCCCCTTTGCAGAT40.15278838808250572No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA40.15278838808250572No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT40.15278838808250572No Hit
GTACGTGGGATACAGGTCATGGGCAGAGCTCCTGGCCTCAGTGATGCCTC30.1145912910618793No Hit
CCGGCCTGTGGTAAGGATGAAAGAATTACAATGTGGAGTATGTCTGAGCC30.1145912910618793No Hit
GGGCAGCAGGAGCAGCAGCTTTTCTTGCAGGAGGTGCATTTGCACTCTTT30.1145912910618793No Hit
GGTGACTCCTGCACCTGCGCCGGCTCCTGCAAATGCAAAGAGTGCAAATG30.1145912910618793No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG30.1145912910618793No Hit
CAACCTGTCCCGACTCTAGCCGCCTCTTCAGCTCGCCATGGATCCCAACT30.1145912910618793No Hit
GTATCAACGCAGAGTACATGGGTCTCTCGGCCTTAGCGCCATTTTTTTGG30.1145912910618793No Hit
CTCCACAGATACCCCGAAGCCATGGCAAGCAAGGGCTTGCAGGACCTGAA30.1145912910618793No Hit
ACATCTGGGAGCGGGGCTGTCCCAGCATCAGGCGCAGCAGCTGCACTTGT30.1145912910618793No Hit
CCCACACTCACAGCACTGGAAGCTCAGTTTGGCCTTGCCGTTTTCCAGCG30.1145912910618793No Hit
CCCAGAATCAGGGCCCAGATGTTCAGGCACTTGGCGGTGGAGGCATAGGC30.1145912910618793No Hit
GTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA30.1145912910618793No Hit
AGTGCAAAGAGTGCAAATGCACCTCCTGCAAGAAGAGCTGCTGCTCCTGC30.1145912910618793No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.1145912910618793No Hit
CTATCATTGTGAAGCAGAATTCACCAAGCGTTGGATTGTTCACCCACTAA30.1145912910618793No Hit
ATTTAACATAAAAAGAAATGCAGCAAATGGCTCAGTATCGTATTGAAAAA30.1145912910618793No Hit
GTGCAAAGAGTGCAAATGCACCTCCTGCAAGAAGAGCTGCTGCTCCTGCT30.1145912910618793No Hit
CGCGTGCAACCTGTCCCGACTCTAGCCGCCTCTTCAGCTCGCCATGGATC30.1145912910618793No Hit
CCGCCTCCGCCGCGCGCCTCCTCCGCCGCCGCGGACTCCGGCAGCTTTAT30.1145912910618793No Hit
ATAGCAAACGGTCACGGTCAGGGTTGTACATAAAAAATCCAGGTTTGTGG30.1145912910618793No Hit
GTCTCTCAGAGCTGGAGAGGGCCCGGCTGCAGGAAGTGGCTTTTTATCAG30.1145912910618793No Hit
ATGAGTAACTGAATGGCATCCCGGGTCCTGTAGCCACGCCCTCCAGATCG30.1145912910618793No Hit
CTTGAGATCTCCAGCCTTACCGCGACTCGAAATGGACCCCAACTGCTCCT30.1145912910618793No Hit
GTCGCTTCCCGTGGCAGGGTCAGCCCAGGGCTTCTCAGCCCCTGCACTGC30.1145912910618793No Hit
CCATTCACATATTTCATAGAAAAAAAGATGTAGCAAACGGGTCAGGGTTG30.1145912910618793No Hit
TGCTGGGACAGCCCCGCTCCCAGATGTAAAGAACGCGACTTCCACAAACC30.1145912910618793No Hit
ACGCAGAGTACATGGGAGCTGGCTCCAGGCTCCAACGTGCCTTCCAGCTG30.1145912910618793No Hit
AGTTGATAGGGCAGACGTTCGAATGGGTCGTCGCCGCCACGGGGGGCGTG30.1145912910618793No Hit
CTCTTTGCATTTGCAGGAGCCGGCGCAGGTGCAGGAGTCACCGGCGGCGC30.1145912910618793No Hit
CCTTTGCAGATGCAGCCCTGGGCACACTTGGCACAGCCCACAGGGCAGCA30.1145912910618793No Hit
GTATCAACGCAGAGTACATGGGACGCCGTCCGGGCTGTCTCTTATACACA30.1145912910618793No Hit
GCCCCTCTCCGGCCCCGGCCGGGGGGCGGGCGCCGGCGGCTTTGGTGACT30.1145912910618793No Hit
TATCAACGCAGAGTACATGGGACGCCGTCCGGGTGGGCCTAGCAGTCGCT30.1145912910618793No Hit
CATCTGGGAGAAGAGCTGTTCCCACATCAGGCACAGCAGCTGCAGTTCTC30.1145912910618793No Hit
CACCAGCCGCTGCGGCCTCTGCTGGTACTCGCTGAGCACATTGCGAGGGC30.1145912910618793No Hit
GTACATGGGACCACGCTTTTCATCTGTCCCGCTGCGTGTTTTCCTCTTGA30.1145912910618793No Hit
CACATATTTAACATAAAAAGAAATGCAGCAAATGGCTCAGTATCGTATTG30.1145912910618793No Hit
CCCAGAGGGTGTCTCCATCTTCCCTATTTATTTTCAGCCCTTGAGGGCTT30.1145912910618793No Hit
GTATCAACGCAGAGTACATGGGGACCACGCCTCCTCCAAGTCCCAGCGAA30.1145912910618793No Hit
CTTCCCTTCATCTCTGGCCCCATCGACAACATGGGGAAGGGGAGTGAGGG30.1145912910618793No Hit
ATTTCATAGAAAAAGGAATATAGCAAACGGCCAGGGTCAGGGTTGTACAT30.1145912910618793No Hit
ATCATTCACATTATTTCATAGAAAAAGGAATATAGCAAACGGTCAGGGTC30.1145912910618793No Hit
GGGCAGGGCCTCTGCGCCCGGCCCCCTCCCCTGAGTAGAAAAGCAGCCGC30.1145912910618793No Hit
TCGGGAGACATGCCTGGCTTATATGCTGCATCCACATAACCATAGATAAA30.1145912910618793No Hit
GGGCTAGAGATCTCAAGCGATAAATGGAGCGACTGCTAGGCCCACCCGGA30.1145912910618793No Hit
GATCACGCCACGGAAGTCGCCTTCCGCGCCGATGGGCAGTTGCACGGGAA30.1145912910618793No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGG30.1145912910618793No Hit
ATACAGGACTCGGCTCCGGGGGCAGGGCGAGGAATGGAAGTTGGAGTACG30.1145912910618793No Hit
GAGAAGAGCTGTTCCCACATCAGGCACAGCAGCTGCAGTTCTCCAACGTC30.1145912910618793No Hit
CCCCGACAGGCACTCATGGTACCGGCGCCGGCGCAGCTGTGACTGTCGCT30.1145912910618793No Hit
AATCACAACTGTAGCAATCCTGGCCAGGGGCAAAACTACGGCAGAGCCAG30.1145912910618793No Hit
CCTGTCCCCCTGCTTCAGGGACGTCCAGATCGGTGACATCGTCACAGTGG30.1145912910618793No Hit
ACCTGTCCCGACTCTAGCCGCCTCTTCAGCTCGCCATGGATCCCAACTGC30.1145912910618793No Hit
AGCAGGTGAAAGCCATCAAAGAATTGGGTGACCACGTGACCAACTTGCGC30.1145912910618793No Hit
GGTGCATTTGCACTCTTTGCATTTGCAGGAGCCGGCGCAGGTGCAGGAGT30.1145912910618793No Hit
GAGGCCTGTGGACAGAACAATCATGAACATTTCCCCAGAGGAGCTCAAAA30.1145912910618793No Hit
GAGCAGCAGCTCTTCTTGCAGGAGGTGCATTTGCACTCTTTGCACTTGCA30.1145912910618793No Hit
GTTCTATTAACATCTGGGAGAAGAGCTGTTCCCACATCAGGCACAGCAGC30.1145912910618793No Hit
GTGTTGAACAGGGACCAGACGACATGGTCGGGCACGGAGGTCTCGCTGCG30.1145912910618793No Hit
CATTATTTCATAGAAAAAGGAATATAGCAAACGGTCAGGGTCAGGGTTGT30.1145912910618793No Hit
GCCCTGGGCACACTTGGCACAGCCCACAGGGCAGCAGGAGCAGCAGCTTT30.1145912910618793No Hit
GTCATGTAGAAAGAGCAGGAGATAAAGTCAAAGCTGACAACTCATGGGTT30.1145912910618793No Hit
GGGCTGCATCTGCAAAGGGGCGTCGGACAAGTGCAGCTGCTGCGCCTGAT30.1145912910618793No Hit
CCCTACGAGTGCAATGGCTGTGGCAAGAAGTTCAGCCTCAAGCATCAGCT30.1145912910618793No Hit
CAGCGAACCCGCGCGCAACCTGTCCCGACTCTAGCCGCCTCTTCAGCTCG30.1145912910618793No Hit
GTATCGTATTGAAAAAAAATCCAGGTTGTGCAGCTTGTTCTATTAACATC30.1145912910618793No Hit
CTCTTCAGCTCGCCATGGATCCCAACTGCTCCTGCGCCGCCGGTGACTCC30.1145912910618793No Hit
CAACTGCTCCTGCGCCGCCGGTGACTCCTGCACCTGCGCCGGCTCCTGCA30.1145912910618793No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.1145912910618793No Hit
GCCCAGGGCTGCATCTGCAAAGGGGCGTCGGACAAGTGCAGCTGCTGCGC30.1145912910618793No Hit
CCTTATAGCCTCTCAACTTCTTGCTTGGGATCTCCAACCTCACCGCGGCT30.1145912910618793No Hit
GTCCGGGTGGGCCTAGCAGTCGCTCCATTTATCGCTTGAGATCTCCAGCC30.1145912910618793No Hit
GAGTACATGGGACGCCTCCTCCAAGTCCCAGCGAACCCGCGTGCAACCTG30.1145912910618793No Hit

[WARN]Adapter Content

Adapter graph