FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003648671

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003648671
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19
Sequences flagged as poor quality0
Sequence length146
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCGACGGGCTGGACGGCGATCCCGACACCCGGCGGCTGATCGCCGGCT315.789473684210526No Hit
CGTTTGCGACTCATGAAATGGGCATACAACTCTGTCTGGGTAATTAAGAA210.526315789473683No Hit
CCCTACCCCCATTGCCGGGTAGGCCCGCGCCACGGAATAGCGGGCTGTGG210.526315789473683No Hit
AGTTATTGGTGACGTCGATGCAGTTTTAAATCCTGGGACACCCATGGCAA15.263157894736842No Hit
AGATAGGACTAATTCTTAGGGCTTCAGTGATGCTGTGGGCATTTTTGCTG15.263157894736842No Hit
CTTCTGAACTCACGTATCCTAAATACATTGTGGGGTCGATGAAAGCTTTC15.263157894736842No Hit
GCCTAAAAAGGATGATAATAAAAAACAAACTTCAGTTCCTTCATTAGGGA15.263157894736842No Hit
ACCTCGGGACGATCGAGAACATCAACCATGACGGGGGCCTTTCGTGGAAG15.263157894736842No Hit
TTTCCGAAACGTGCCCGGCGTGCAGGGCTACGACCTGTTCAACGAGCCGT15.263157894736842No Hit
GATCAGCATGTGTGTAATTTCAACTTTTGGCTTCATTTGAATATTGGACT15.263157894736842No Hit
CCTGCCAGGAGGCCTTGCGCTTTTCACCTACACCTGACCTCTCACGCATA15.263157894736842No Hit
TCGCCCAACTCACCCGTCAGCTCAACGGGCCGGTACCGTCCCTACGCGAA15.263157894736842No Hit
CTCCTGGGTGGTCGACAGCGACGTGAAGAGCTTCGCCTCCCCCGGCGCCA15.263157894736842No Hit
TTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACA15.263157894736842No Hit
AAGTAACATGAGGCCTGAAAACTGACTGAATTTGCCAATGTGACCTTTAC15.263157894736842No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)