FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003648672

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003648672
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19
Sequences flagged as poor quality0
Sequence length146
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGATGCGTTCGGCCCGGTTCACGCCGCCGCCTCCGAGGCCGGCTGGACC315.789473684210526No Hit
AACCTTGCCTCGTGCCCGCCGCCTCACCAAGGAGATGCTTCTGTACTGGA210.526315789473683No Hit
CTTCGCTCTTCACCGGCGTCTCCACGATGCGACTGGAGGTGTTTGCGGCG210.526315789473683No Hit
GCTACATCCTGTTGCGGGTGTCGGGCTGGATGGCGATGACGCTGCTCGCG15.263157894736842No Hit
ATAGTGTCCAGAATATCCTTGAGAAAACATGTAAGTTCACCCAAGAGGAT15.263157894736842No Hit
TAATATGGGTGTTCTTGCATAAATGTGTAAGATTTTAAAGGGAGAGGAGG15.263157894736842No Hit
GTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTCTGACCTTTT15.263157894736842No Hit
TGATGGCGTCGATCTCGTTGTTGGTGGCGTCCAGCCGGGGCATGAGGTCT15.263157894736842No Hit
CTGCCAACGATATGGGGAAAGCTTTCATCGACCCCACAATGTATTTAGGA15.263157894736842No Hit
GTCTGCTTGGCAGGCAATCAAGCTAAAAGAGAAGCTGGCAAATAAACAGT15.263157894736842No Hit
GCCGCCATACCAGCCGCCGCCGTACCAGCGCCGGCCGTAGTAGCCATAGC15.263157894736842No Hit
GCGTGAGGCACCGCGTGTAGCGGTGGCCCGGGAACGGCTCGTTGAACAGG15.263157894736842No Hit
GCCGAGAGCATCATCACAGCTGTCGCCCCCGACATCGCCGGGCGTATCAG15.263157894736842No Hit
CTTATCCGTTGAATCCAACAAATCTGCAGGGTTGGTATGCTCAACAGCTG15.263157894736842No Hit
GGAATGCAGTGATGCAATCATGGCTCACAGTTCTCCAGCTCCTGGGCTCA15.263157894736842No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)