FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003649913

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003649913
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length146
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCAGCCGCCACCGCCACGATCTTGTGGCTGCCGGGCTCGGCGTCCTCGGG29.523809523809524No Hit
CTTATGGAACGCAGTCAGTGGTGACCTTTGACTCGGCAAATGTGACTCGT29.523809523809524No Hit
TGAGGCTGCAATGAGCAGCGAGCACCACTGCAATCTCACATGGGTAACCA29.523809523809524No Hit
GTGCTGGGTGCTGCCCGTGGCGGCCTTCGGTACTTCCAGAGTCTCGATGG29.523809523809524No Hit
TGATCGAGGTGCCGCCGTCGGGTCGGTGCTCGACCATCCGACCGTGGTCG29.523809523809524No Hit
ACCGAAGAGTTGGCGACGCCCAGGCGGGCCGCCAACTGCGAAGAGTTGAT14.761904761904762No Hit
GCGCGGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTGCCGAA14.761904761904762No Hit
CCTTTGGGGGAGCGGGACCTCGGGGACCGGTTCTGCGCGGTCCCACGCGA14.761904761904762No Hit
ACGCTGCCAAGGCCCGTGGCCTGGAGCGCTCGATCCGTGCCCATGTGCTG14.761904761904762No Hit
CCGCTGCTGCCCCCGTACATCACGGCCCTGGTGGCCGGGCCGTACGACGT14.761904761904762No Hit
GGCTTCGCCTTCGGCCAGCACGATGATCCGGCAAGGATGCTCGCGACTGG14.761904761904762No Hit
GTAAAAGGGCTTGGAACTTGGGAGGAACGCAAGGCTAGGTAAGTAGGTTC14.761904761904762No Hit
GGCCAAGGAAGAGAAGGGTCGCGGCAACTACACCAGCGCGGGCGTGGGCA14.761904761904762No Hit
CGTTTTCGGGCCGCGGCCAGTTTCATGCTGTCTCTTATACACATCTCCGA14.761904761904762No Hit
TAAAGTGGCTTATACGCAACTATTCGATGAACTCAAGATCCCTTATGTGG14.761904761904762No Hit
TCGCAAAACAACCATTGTTTGACATGCCTCAGCTGAAACAAGTAACTCAC14.761904761904762No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)