FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003649914

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003649914
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length146
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCTGCCCGGCAAAACCGGAATCCAGGTGCTCGATCTGAGCCAGCGCCC29.523809523809524No Hit
CTGTGAAAGAGTATATGTGAAACTAGAATAATGTCTCGTACGAACGTTTG29.523809523809524No Hit
GACCTGTCAGCACTCAGGCTCCGAGCAAGCCCAGCCCAGCAGAGCGCGCC29.523809523809524No Hit
CTCGTCGGCATCCACAGACGCCGGTGCTTGCTTGTAGCCTCGCACCATCG29.523809523809524No Hit
ACACGGCCGGGCTACACATGGATGCGAGGGTGGTAAGCGACGTTGCGTGG29.523809523809524No Hit
GCCGGAGTCTGCAGCGGCAACCACATAAGGGATCTTGAGTTCATCGAATA14.761904761904762No Hit
GGCAACATTGTCAAGGGATCTTGATGAACTCGGGGCAGTGAAATTGCGTG14.761904761904762No Hit
AAGGCGTCACGATCAGATTCGGCTCGAAGGTCCCCGGAACCCAAATGGAG14.761904761904762No Hit
ATTTTATAAAGGAAGTCTCATGCTGAAATCGCAAATATTCCATGTTCCAT14.761904761904762No Hit
AAATCACCGAAGCCTTCGCCGCCCAGGTGCTCGCCTGTGCAGATCTGCTC14.761904761904762No Hit
CCTGGGCCCTGGTCGTGAGCCAAGTCGTGCTGAGCTTCGGCATCCCGTTC14.761904761904762No Hit
CATGAAACTGGCCGCGGCCCGAAAACGCTGTCTCTTATACACATCTGACG14.761904761904762No Hit
GTGGGCACGTCGGGCAGCATGGGCAGGCGCTCGGGCGAGCTCACGGCGAT14.761904761904762No Hit
CCCGTCCGAGGAGGTCAACTCGTCGCGCACGACGTCGTACGGCCCGGCCA14.761904761904762No Hit
CAACGGCTGCTCAAAGAAGCCGAAATGCTGCTGCAGACCTACCGCGATGA14.761904761904762No Hit
CCCGTTTTCCGCTTGCCAGAAAGGGAGGCCTCGTTTCGCCATTTCCTGTG14.761904761904762No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)