FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003649915

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003649915
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length146
%GC61

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGATAGGCCGGATCCTTGACTCCGGTGGAGGCCCACAGCGGGCGCTGCG313.043478260869565No Hit
GCACCGAATTGGCCTCGTCGTAACGGCCGGAAATGGTGTTGCCTTCGATC28.695652173913043No Hit
GAATAAAATCGTATGCCGGATAAGGCGTTTACGCCGCATCCGGCCTATTT28.695652173913043No Hit
TCAGCCGCCACCGCCACGATCTTGTGGCTGCCGGGCTCGGCGTCCTCGGG28.695652173913043No Hit
CGCTCGAAGGCGCCGATGGCCCCTTCGGCGGCAACGCTCTGGCGACCAAC28.695652173913043No Hit
CATAAGGGGCGATGGCGCGGACATACTCGGGGCCGAACTGCAACGACATG28.695652173913043No Hit
GGGCTGGGTCATGCTGGCGATATGGGGCGTGAGCACGATGTCGGGATGGG14.3478260869565215No Hit
ATTCAGAGGTGTGCCGATAGTTGACTGTTAGTTCCAAAAATAGCACTTTC14.3478260869565215No Hit
CGCTCGAAGGCGCCGATGGCCCCTTCGGCGGCAACGCTCTGGCGTCCAAC14.3478260869565215No Hit
GCAATATGTCGATCAGCTCTACTCGGCGGCAATGCGGATGGCGCGGAATC14.3478260869565215No Hit
GGCGTAGACCAGCCCACCCAAGCCGAGAACCGCGAGCGCAGCCCCTAGCC14.3478260869565215No Hit
AGTGAGAACAACAAAGAGATTTCGCTGATCGAACATGCGCAGTTGGATCA14.3478260869565215No Hit
GGTGTTTTTTGAACAGAGAACCGCCCTTTGTTCAAAGAGCAACATTAAAT14.3478260869565215No Hit
GGCTTCGCCTTCGGCCAGCACGATGATCCGGCAAGGATGCTCGCGACTGG14.3478260869565215No Hit
TCTGCGCTGAGCGCCTGGGGCAGGGCCGGGCGCGCCGCCGGGGCCGTCGC14.3478260869565215No Hit
CTGCGCAGAAGTGCGCGCCCTCACCGGTCAGCACCACGGCGCCGATGGTG14.3478260869565215No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)