FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003650007

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650007
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Sequences flagged as poor quality0
Sequence length146
%GC65

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCGACCAGCGATGTACTCGCGGGCCGCATTCATGCCGGCAAGCCACTCC317.647058823529413No Hit
GACCGGCCACGACGTGGCGACCCAGCTGATCGAGGCCGCGTTCGAGGGCG211.76470588235294No Hit
GTTCAACACCTTCGTGCTGGCCGTGGGCGCACAACTGCCCAGTGACGTGC211.76470588235294No Hit
CCGTCGACCAGCACCGTGTAGATGCCGGTGACCGAGCCGACGGGTCCGGT211.76470588235294No Hit
GGATTCCACAAAGGTGCCGAATCCCATGTTAATTAAAAATCCGGGTGCGG15.88235294117647No Hit
GTCCTGATTCCCAATCCCCAGGGGAGCTCATCATCAGGTTGGCTAAGATG15.88235294117647No Hit
GACACTGCCCGCGTGCTGGGTCGCATGTATGACGGTATTCAGTATCGCGG15.88235294117647No Hit
GTATTCACATACACCAGCTCAATGCCTTTACTGGCCGCCAGTTCCACCGG15.88235294117647No Hit
GCGTTCGACCTCTTCCGGCGAGCGCCCCGGCGCTTCCGTAGCGATCTGCA15.88235294117647No Hit
GATCACGTTGAAGAGCATCAGCAGCACGACCACGACCAGCGGAACGCCGA15.88235294117647No Hit
CCTCGATCTGGCCGGAGAACGCGACCGCGGCGTCGACCCGCGGGTTCGAG15.88235294117647No Hit
GTATTGAGAGGACACCCGCGAGGTCATGCCGTGGACGCTGGAGCATCCCG15.88235294117647No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)