FastQCFastQC Report
Tue 10 May 2022
EGAF00003650113

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650113
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences302682
Sequences flagged as poor quality0
Sequence length146
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT4210.139089869896459No Hit
GTGCAGGACTGAGTCAGGACTCCCACGCTGGCCAGGCAGCCCTGCTCACA3710.12257088297288904No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCG3410.11265949081874706No Hit
TCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATT3270.10803417448014749No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA3150.10406961761849069No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT3100.10241771892613369No Hit
TTCCTGCACTTGGCCATCATCCATGAAGAAAAGGCACTGACCATGGAAGT3060.10109619997224811No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)