FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003650301

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650301
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences118
Sequences flagged as poor quality0
Sequence length146
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTGTGACCGCTCAGTCCTCTTGCAGCCTTTGGAGCCCTTTCCTTTCTT43.389830508474576No Hit
GTGCAGCAGCACAGGTGGACAGGCCAAGGGTGGCCAGGGAGACGAGGGCA32.5423728813559325No Hit
GGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTGGTGCATG32.5423728813559325No Hit
ACCCAAGGCAGTGATGGAGGGGCTCAGGACTGTTGCCTCAAGTACAGCCA32.5423728813559325No Hit
GAAGTGGACAGAAGCGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAAC32.5423728813559325No Hit
CTCAGGTAACCTGCCTGCCTTGGCCTCCCAAGGTGCTGGGATCACAGGCA32.5423728813559325No Hit
AGCCTGTGGCTACAAAAATGTTGAGCCGTAGATGCCGTCGGAAATGGTGA32.5423728813559325No Hit
ATCTGCTCCTTGGTGCGGATGTCAGGCCGCAGCCACTGGCGGGACAGCTC21.694915254237288No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG21.694915254237288No Hit
ATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAGGCACGGCGA21.694915254237288No Hit
AGATAGAACCTTCCAGAAGTGGGCAGCTGTGGTGGTGCCTTCTGGAGAAG21.694915254237288No Hit
GACACGGACAGGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTG21.694915254237288No Hit
GGGCAGTGAAGTCGGACGGACTCAACGCCCCTCTTTACAGCAAATACCAG21.694915254237288No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA21.694915254237288No Hit
GATGACAGCCTCACTGGACCGATTTCCATTCATGAAGATGATGCTAAGAA21.694915254237288No Hit
GATTATGTTTGAGACCTTCAACACCCCGGCCATGTACGTGGCCATCCAGG21.694915254237288No Hit
CCTTTGGGTCTGCACATAGCTCTGCCTGAGAGCGCTTGCGGGGCAAGAAC21.694915254237288No Hit
GTCCGGGACCCTGCGAGCGGCTGCTGAGCCGGGTGGCCGCCCTGTTCCCC21.694915254237288No Hit
CACCAGGAGTGGAGCCTGCGGCTTAATTTGACAACACGGGAAACCTCACC21.694915254237288No Hit
GGACAGACCCCCAACTTGCAGCTGCCCACCTCACCCTCAGCTCTGGCCTC21.694915254237288No Hit
TCCATAACCAGGAGGAGTACGCGCGCTTCGACAGCGACGTGGGGGAGTAC21.694915254237288No Hit
GGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCAT21.694915254237288No Hit
GGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCA21.694915254237288No Hit
TCTAGGAGCAGTCCCAGCGGTGGCCTCAGCCACGTGAGGAAGAGGGCTTT21.694915254237288No Hit
GCCTCAGCCCTGGGCGCTGGGGCTCCTGCTCTTTCTCCTTCCTGGGAGCC10.847457627118644No Hit
GGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCACTCCCGA10.847457627118644No Hit
ATCCTCCACCTCCTGGGTTCAAGTGATTCTCCTGCTTCAGCCTCCCAAGT10.847457627118644No Hit
AGAGAGGGCACCACCAAAAGTGAGGTCTTCTACCCAGGGGAGACGGTAGT10.847457627118644No Hit
GTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGC10.847457627118644No Hit
CCAGTGAGTTGTGCTTGTTGAATTCTGCCCTCACTGCAGATGTGCAGGTC10.847457627118644No Hit
CCATTAAGTAGCGCATGTAATCTGCAACATTCTGGCCCATGATGTGCTTC10.847457627118644No Hit
CCCCCACTCCATTTGCAGGCCCTAGTTGGCAGGCCATGTGGGCACCCAGG10.847457627118644No Hit
CACTGAGACTGAGGCCTTGGCTTCCAATCTGATGGGCATGTTTGAGAAAC10.847457627118644No Hit
CCCCCGTTACTTTAGCACTGTGTTTGAAGGAGGGGTGACCGACCTGTATT10.847457627118644No Hit
GTGTATAATTGCCTTGTACGTTCCAGGGAGTGTGTTTATTGTTCGGATTC10.847457627118644No Hit
AGATTGCACCGTTGTTATAATCGACCCGGGCTGCGACAATCGGCCGTATG10.847457627118644No Hit
CTCTTACTCACCCTCTACCACAGACATGGCTCAGTCACTGGCTCTGAGCC10.847457627118644No Hit
GCCCTGGCCCTGACCCAGACCTGGGCGGGCTCCCACTCCATGAGGTATTT10.847457627118644No Hit
AACAGCCATCACAGCTCCTAGGACAGCTAGGACAGCCAGGACAGCCAGGC10.847457627118644No Hit
AGGTGGTCTCGCTCAGCACGTAGAACTCCTCGGGGTCCTCCTGATCCTGG10.847457627118644No Hit
GGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACCGCG10.847457627118644No Hit
CCCCAGGCTGGTCTCAAACTCCTGAACTCAGGCAGCCCGCCTACCTTGGC10.847457627118644No Hit
CATCTGGACAAGACACCATCCCCACAGAAACCAGCCCAGGGCTGCAGGAA10.847457627118644No Hit
AGCTGTATCTAACCCACCGTGTGAATGAACTGGGAGAGGGGCATGCTCCC10.847457627118644No Hit
GATCTGAACAGGCGCTGGAGCCCACACTTTCTCTGAGAGAGAATTTATGT10.847457627118644No Hit
CATCTAAGGGCATCACAGACCTGTTATTGCTCAATCTCGGGTGGCTGAAC10.847457627118644No Hit
GGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCCGCCGGCGC10.847457627118644No Hit
GCAGACATGGGTGACCCTGCGGCAGCGACACACAGAGGGTGCCATCCTGT10.847457627118644No Hit
CCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGGCG10.847457627118644No Hit
GAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTT10.847457627118644No Hit
CCTTTGGGTCTACACATAGCTCTGCCTGAGAGCGCTTGCGGGGCAAGAAC10.847457627118644No Hit
ACACATGCTAGCCGCTGGGGAGATTAGCTCGAGTTGCCCCTTTGCCCGAT10.847457627118644No Hit
CAGCAGGAGAGGCTCAGAAGGGAGCCTCTCGGGAAGTGCAGGCAGCCATG10.847457627118644No Hit
GGGTAGAGCTGGGAATGCAGATGGGGTGGTTAAAGCAGGAGAAAGAGTGT10.847457627118644No Hit
TGATCTCGGTGGTGTAGCGCAGCTTCCAGCCCCGGCTGTCCCCCGACTCA10.847457627118644No Hit
GGATCAGGAAGATATTGCATTGTATTTAGTAACATGAGTACCTCAAGCCT10.847457627118644No Hit
GGCCCAGCCCTGTCGGTTGTCTCGGCAGCAGGTCTGGTTATCATGGCAGA10.847457627118644No Hit
GTGTGGGACTGAGAGGCAAGATTTGTTCCTGCCCTTCCCTTTGTGACTTG10.847457627118644No Hit
CGTGATGGTGCCTGCGTCCTTGGTGGCCTGGCGCTGCGAGTCGTTGAAAT10.847457627118644No Hit
GGCTGCTCACTGGGCTATGGCCCTTTAGGGGTCTGTGACCGCTCAGTCCT10.847457627118644No Hit
GGGAATGCAGATGGGGTGGTTAAAGCAGGAGAAAGAGTGTGGCAAGGCCA10.847457627118644No Hit
GCCCAGGGCTGCAGGAAGGACAGGGGGGCCTCCAAGACTGGCAAGAAAGG10.847457627118644No Hit
CTCTACCACAGACATGGCTCAGTCACTGGCTCTGAGCCTCCTTATCCTGG10.847457627118644No Hit
GTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAATGG10.847457627118644No Hit
CTCCCGACCCGGGGAGGTAGTGACGAAAAATAACAATACAGGACTCTTTC10.847457627118644No Hit
GGCTTAACCCTAGAGACACAGTAGACCAGTTTCAGCTTACATTTAAGATG10.847457627118644No Hit
ACATTCAGCCGTTCAAACTCTGGGAAAATCAGTTTGCAAATACTCTCTGC10.847457627118644No Hit
CGCCAAGGTTGTCCGCAGCTACCGGAAGCAGGAACCAAGCTTAGGCTGCT10.847457627118644No Hit
GGCCAGGAGAGGGAGGAGGGCAGTGGGCATAGAGAACAGCGTCCCTGACG10.847457627118644No Hit
GGCTACGCCCTCCCCCACGCCATCCTGCGTCTGGACCTGGCTGGCCGGGA10.847457627118644No Hit
GTTCCATCCCCTGCAGGCCTGGTCTCCACGAGCTCCGTGTCCTGGGTCTG10.847457627118644No Hit
GCGCCGGTGAGGCTGGTGGGGTCTCCAGGGCTCCAGGCTGCTCACTGGGC10.847457627118644No Hit
GGCCCACACGCTGCATAGTGGTTTGCGCCGCAGCCTGCAGAACCTCCTAG10.847457627118644No Hit
GACTCTCCCTCCTCGGTCTCTCTGGACCTGGCCTGCTGTGGGCAGCTCAG10.847457627118644No Hit
GAGGTAGTGACGAAAAATAACAATACAGGACTCTTTCGAGGCCCTGTAAT10.847457627118644No Hit
GAAGCAGGTGGGGGCTGGGGCAAGGAAGCTGAAGGGGTCCAGGACCCTGG10.847457627118644No Hit
CCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAAC10.847457627118644No Hit
ACCCTAATGAAAGACCTGTAACCCTGTATCATTTGCTAAAGCTGTTTCAA10.847457627118644No Hit
CCGCAGACCCGAGCGAAAGCGGCGGTCCTTACAAGTCCGCTCCTCGGGGA10.847457627118644No Hit
GTATAAATCATATTTACAAGGAAGAGGTGGGGTGTACTAGGGAGCCGTAT10.847457627118644No Hit
GTACATGGGAGCAGGCCAATCCCAGCCCACGCACAGACCCCCAACTTGCA10.847457627118644No Hit
AGCCAGGCCAGCAACGATGCCCACGATGGGGATGGTGGGCTGGGAAGATG10.847457627118644No Hit
CTCCTAAACACATCCGTATTACTCGCATCAGGAGTATCAATCACCTGAGC10.847457627118644No Hit
CTTCTCGGCCATCTCCTGCTTCTGGGACCTGCCAGCACCGTTTTTGTGGT10.847457627118644No Hit
GGAAGAGGTGGGGTGTACTGGGGAGCCGTATCAGGTCCAGGGTCCTGATG10.847457627118644No Hit
GTCCAGGATATCAATCCTATTAGTAGCCATGATAACCTTGATGTTCTTGG10.847457627118644No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)