FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003650302

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650302
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences118
Sequences flagged as poor quality0
Sequence length146
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTCAGGACTGTTGCCTCAAGTACAGCCAAAGGAAGATTCCCGCCAAGGT43.389830508474576No Hit
GTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCCTGGTGATGCCTTGTTT32.5423728813559325No Hit
CCGTGAGCGAGGCTGTGGTGAGCAGCGTCAACACTGTGGCCACCAAGACC32.5423728813559325No Hit
GGAGGGCACTGGCCCCCAACAGGCATCACCCCGCTAAATCCCCTAGAAGT32.5423728813559325No Hit
CCCCTGTCCTTCCTGCAGCCCTGGGCTGGTTTCTGTGGGGATGGTGTCTT32.5423728813559325No Hit
TAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTTACCCG32.5423728813559325No Hit
GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGA21.694915254237288No Hit
GAGAAGAGGAGGATGCGGCGGTGGCCATCTCCTGCTCGAAGTCCAGGGCG21.694915254237288No Hit
GTCACTGGCTCTGAGCCTCCTTATCCTGGTTCTGGCCTTTGGCATCCCCA21.694915254237288No Hit
ACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGTGACGACC21.694915254237288No Hit
GAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTTAC21.694915254237288No Hit
CTGTGGGGATGGTGTCTTGTCCAGATGCTGCATCAGCTGCTGCACCCAGA21.694915254237288No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGATGCGTG21.694915254237288No Hit
GAATTCTCCAGATTACTTCCATTTCCGCCCAAGCTGCTCACAGTATACGG21.694915254237288No Hit
GCTCTCACCAACCCCGTAGTTGTGTCTGCAGTAATTGTCCACCTGGCCCC21.694915254237288No Hit
GGCCGGTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCT21.694915254237288No Hit
TCCGGGACCTTGCGGCCAGTGATGATTACAGAGGATGCCTGGATCTGAAG21.694915254237288No Hit
CCCCTGCACGAGGAGGACGTGGGCTCCAGTTTCCTGGTGGACCCATTTCC21.694915254237288No Hit
CAGCCATCACAGCTCCTAGGACAGCTAGGACAGCCAGGACAGCCAGGCCA21.694915254237288No Hit
GATCGCGCCACTGCACTCCAGCCTGGGCAACGGGGCCAGACCCTGTCTTA21.694915254237288No Hit
CTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAGGC21.694915254237288No Hit
CCTAAAGCCCGTAGGGGCAAGGCTCGCCGTAGAGCTGCCAAGCTCCAGTC21.694915254237288No Hit
CAACGCAGAGTACATGGGAGCTACCGGACAAAGAGTGACGCCCGGAGCTG21.694915254237288No Hit
CTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTA21.694915254237288No Hit
GAACCCAAGATGCAAGAAGGAGGCTATGCTCAGGGGCCCTGGAGCAGCCA10.847457627118644No Hit
CCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCCTGCTTTGAACAC10.847457627118644No Hit
ATTTGGCTCGTGAGAAGGCAGACATACTGAAAACTGGGAGCTTGCTCTAG10.847457627118644No Hit
GCACATAGCTCTGCCTGAGAGCGCTTGCGGGGCAAGAACAGGATAGCTGG10.847457627118644No Hit
GCCGAGGAGTCCTGCCCCGGCATCTCAGACAAGCTGATGGTGCACCTGGT10.847457627118644No Hit
GGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGCC10.847457627118644No Hit
ATCAACGCAGAGTACATGGGACAGACCCCCAACTTGCAGCTGCCCACCTC10.847457627118644No Hit
GCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTG10.847457627118644No Hit
ATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTA10.847457627118644No Hit
GGCCAGTCCCCACCCCAGGTGCCCTGCTTGAGGTCGAAATTCATGAACTC10.847457627118644No Hit
AGCTTAGGCTGCTCCATCCCAGCTATCCTGTTCTTGCCCCGCAAGCGCTC10.847457627118644No Hit
TCGTTGGTGTTCTTGATGGGGTGGCTAAGGATACAGATGATGCGGATAAC10.847457627118644No Hit
CTCTTACTCACCCTCTACCACAGACATGGCTCAGTCACTGGCTCTGAGCC10.847457627118644No Hit
CCTGCCCGCTCCTGTCCATCCGCAGGTCTTCCTTCAGGCCTGGCTGGTCA10.847457627118644No Hit
CTCCTTAAGCTCTGCAATCTCAAAGCTTGTTTTTTTCTTAGCAGCTTCTA10.847457627118644No Hit
TCTTCTCCAGTCCAGCCACGATCTCGCTTCCTCGCTGACACTGCCCCTCA10.847457627118644No Hit
TCTCTTTCTTGATCCAGTCCACGTAGTTGAGCACTTTGGTGTAGAAGCCA10.847457627118644No Hit
CGTGAAGTCCGTGGAAGCCTGTGGCTACAAAAAATGTTGAGCCGTAGATG10.847457627118644No Hit
GCATCCTCTGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCGGA10.847457627118644No Hit
CCTTGCCATGTTGGAAGACCCCGACGCACGAATAGGTGGTGCCCAGGTCG10.847457627118644No Hit
GATCGCGCCACTGCACTCCAGCCGGGGCAACGGGGCCCGACCCTGTCTTA10.847457627118644No Hit
GGATGGGGGGAAGCGGGAGATGTGACCACGACACCACACACAAGCTCGAT10.847457627118644No Hit
GACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCC10.847457627118644No Hit
GTCCTGTGAGGGCAGAAGAGGGGTGTGAGGGGCTGACTCTTGCAGCCTTT10.847457627118644No Hit
ACCCCCTCTCTGACCATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTC10.847457627118644No Hit
AGTAAACGCTTCGGGCCCCGCGGGACACTCAGCTAAGAGCATCGAGGGGG10.847457627118644No Hit
GAATAACGCCGCCGCATCGCCGGTCGGCATCGTTTATGGTCGGAACTACG10.847457627118644No Hit
GAAGTGGTCTCGGGAGAATCGGATCAGAGCATCACTGAAGCTCCTCAAGA10.847457627118644No Hit
TCCCAATACTCCGGCCCCTCCTGCTCTATCCACGGCGCCCGCGGCTCCAT10.847457627118644No Hit
GTGGAGAGCCTACCTGGAGGGCACGTGCGTGGAGTGGCTCCGCAGATACC10.847457627118644No Hit
GCCTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA10.847457627118644No Hit
GACCTGGGGACCCTGCGCGGCTACTACAACCAGAGCGAGGCCGGTTCTCA10.847457627118644No Hit
CTCCAGGGCTCCAGGCTGCTCACTGGGCTATGGCCCTTTAGGGGTCTGTG10.847457627118644No Hit
CAGCCCCACCTCTCTGGAACAGGAAAGATGATTGGGGAGGGAGCACAGGT10.847457627118644No Hit
AAATTGACCTCCCTCAGGAAGCTAAGAAATACTATCTCGGCAATAGGATT10.847457627118644No Hit
CCCTCTACCACAGACATGGCTCAGTCACTGGCTCTGAGCCTCCTTATCCT10.847457627118644No Hit
GGGTAGAGCTGGGAATGCAGATGGGGTGGTTAAAGCAGGAGAAAGAGTGT10.847457627118644No Hit
GGCCAGCATGGGGTGGCTGCTCCAGGGCCCCTGAGCATAGCCTCCTTCTT10.847457627118644No Hit
GGGTAAGAGACACCAACACCATGTTCTGCACGAAGCTCATGGATCTCAAG10.847457627118644No Hit
GGGGGGAATTCAGATAAAACGAATAGCTCGTAACCAAACATGCACAGCGG10.847457627118644No Hit
GCTCTGGGGAAAGTTGTGTGCCCCTCTGCCCCTGACGCTGTCCGCAGCTG10.847457627118644No Hit
GGGCTGGCCAGCCCACGAGGGGGACATTCTGCAGATCAAGGCGGTGGAGG10.847457627118644No Hit
GCCTCAGCCTCCCAAGTAGCTGGGATTACAGGTGTGTGCCACCATGCCTG10.847457627118644No Hit
ATGCATGTCTAAGTACGCACGGCCGGTACAGTGAAACTGCGAATGGCTCA10.847457627118644No Hit
GCAGTAGCTCATGCCTGTAATCCCAGCACTTTTGGAGGCCAAGGTAGGCG10.847457627118644No Hit
GAGGCACAGATGGCAGCCGCTGCCGCCCTAGCCCGGCTGGAGCAGAAGCA10.847457627118644No Hit
GGCCATGGCAGCTTTCATGGCGTCTGGGGTTTTACCCCACTCATCTTCAG10.847457627118644No Hit
GTCTTCAGGCAGTCTCGGGGACTGAGGTTGTAAGTTTTATGTCTCGACAT10.847457627118644No Hit
TAGTAAGATTCATTTGCCACCCGGTTTCCGCAGGCTAATCCTCTGTCGCC10.847457627118644No Hit
GATCTATGAAGGCCAAGTGGAGGTGACTGGTGATGAATACAATGTGGAAA10.847457627118644No Hit
ACTTTAACCTGGCTTTTAAAGCAGTAGTAACTGCCCCACCAAAGGTCTTA10.847457627118644No Hit
GGACAGGGGGGCCTCCAAGACTGGCAAGAAAGGAAAGGGCTCCAAAGGCT10.847457627118644No Hit
CCTTTCCCTCTCTCCATCTTCCAATCCCTGGAAAAGTCTGGTCTGAGTGT10.847457627118644No Hit
GCCTGGAGCCCTGGAGACCCCACCAGCCTCACCAGCGCTTGAAGCCTGAA10.847457627118644No Hit
GCACAAGATCCTGCCCAACAAGGTAGACCCATTAGTGTCACTGATGATGG10.847457627118644No Hit
GATCCACACCGAGTACTTGCGCTCTGGGGGTGCGATGATCTTGATCTTCA10.847457627118644No Hit
GGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGA10.847457627118644No Hit
GTCTCAGGGGATCTGCATATGTTTGCAGCATACTTTAGGTGGGCCTTGGC10.847457627118644No Hit
TTCCAGATCTGTCTCAAGGGTGGTTCTCTTCCCCACTACATCCATCCCCA10.847457627118644No Hit
CCCTGATTCCCCGTCACCCGTGGTCACCCTGGTACGCACGGCGACTACCA10.847457627118644No Hit
CATCAAGGATGCCCTCCTGAAAGCCAACCTCATGACAGATGACCTCCCTT10.847457627118644No Hit
CTCTCAGGCAGAGCTATGTGCAGACCCAAAGGAGCTCTGGGTGCAGCAGC10.847457627118644No Hit
GGAAGAGGTGGGGTGTACTGGGGAGCCGTATCAGGTCCAGGGTCCTGATG10.847457627118644No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)