FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003650353

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650353
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences119
Sequences flagged as poor quality0
Sequence length146
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCTGGTACTGATCCACAAGAAGGTGCTGCTTTAGCAATTGCAATGCTTG32.5210084033613445No Hit
CTTGATGCCGTTGTCCGGCATCGGGTTGTGGGACGCGGAGATCATCACAC21.680672268907563No Hit
CAAAAAAGTCTGGCCGTTCTTGGCCGTCTGGCTGATCCTTTTTGGCGCCC21.680672268907563No Hit
GGTGAGGACAACACCCGAGAGGTTGTGGAGGCCTTTGGGGATGAGCGGAT21.680672268907563No Hit
CGGTGACCGGGTTGCCTTCGGAGTGGTCGATGGCGTTCGCGATGAGGTTT21.680672268907563No Hit
CCTTTTGAGGCTCCTTTTACAATCCCAGCGATATCTGTAAATTCAAATGC21.680672268907563No Hit
GAAATGGTGTGGTTCCGCCATGCCGGAATATAAAATGTACAAATCGTTTT21.680672268907563No Hit
CATCTAGATCCCGTTCTTCTACCGATTGCACCAATTCAGAAAAATATTTT21.680672268907563No Hit
ATCTTACACTAGATAAAGTGACAGCAAAAGAAATCAGAGGCTTCCTGCTT21.680672268907563No Hit
GGCCTATGCATCACAAATTATTATAGTATTTTTTGAAACTTTAATATTTG21.680672268907563No Hit
CACCGAGCGTCGTGCCCAGGCCCAGCAGCAGCATGTGCGGATTGCTTACC21.680672268907563No Hit
GGATTTAACAACCCGCAAAAATCTCAGTGGTTACAAGACTGGACAATTTA21.680672268907563No Hit
GTCCAACGCGTGCGCATGCGCAAAATGTAGCTACTTGCCAAAGCGGCGGG21.680672268907563No Hit
TTATGGGGCACTTTTAAAGATTTTAGAAGTAGGAAAATCAAGGAAGTCAA21.680672268907563No Hit
CTCCAACGTGCCTATCGACGCACCTTCGGATACCCCCAAAAAGACCCCCA21.680672268907563No Hit
GTTTTCTCGTGAGTGGCTGCGAATGTGACCGCGTCTGTGACCGCGTCGTT21.680672268907563No Hit
GCATGGAAAGCGTGTCCACCACCGCGGAAATGCCGGGCAGGGTAAACGCG21.680672268907563No Hit
GCTGATGATCTACCACATGTGCCAACTGGTCATCTGCTCCGCGTACGCCT10.8403361344537815No Hit
GGTTGGAAACAGCCTGGGGCGTTTTGCGTTTGCACGCTAAACGCCGATAT10.8403361344537815No Hit
AACGCCATCAGTTTGGAGCAGCCCCTGAATATTATCCAAGTGGCCGACTT10.8403361344537815No Hit
GCCCTGCACCGCGCCCTGCTGATCTTCCCGTGGTCCGCCGCCGAGGCCAC10.8403361344537815No Hit
GGGAGGGGAAATATGTGGGTGCTGTCGAAAAAGCAACACCACCTGATCCT10.8403361344537815No Hit
AATATAACCACCTAGGAGGGTAAAAATGAAACATCAAAAAAGCAATTCTC10.8403361344537815No Hit
AATAAAAGGAGTAGAACGACGGCAGGCACAAGTATGTATTTTGGAATGAG10.8403361344537815No Hit
ACTAAACCCAGTCCAAAGAACGAAGATAAAGTTAATGCCATCGTACTATC10.8403361344537815No Hit
GTGTTGATCCTGAGTGACTTGTAACGCCAGCTATTTGTAACTTGAAGCGG10.8403361344537815No Hit
CAGTAGACCGCCTCCACGTGGTTGGCGTACCAGAAGTCGTTCTCGGTGCC10.8403361344537815No Hit
GTACTGTACGCAGTGTTCATTCTGGCTTAGCAAGGCTGGTGATTTTAAGA10.8403361344537815No Hit
CGCATGATGCCGGTGACGATGATGCCGGTGACCGAGGACCGGGTGAGGTA10.8403361344537815No Hit
ACAGTCGCGCGCTCTACCGACTGAGCTATTGCGGAATAATGTTTAATATA10.8403361344537815No Hit
CCGGTCAACCGATCGGTTGATCTACGCTCAGACGCATGTTGTCCACCACC10.8403361344537815No Hit
GTACAATCCGTGTTGCTTTTGGCCCAGATGAAGAGATTGGCCGAGGAGCT10.8403361344537815No Hit
TCCCGGAGGGCAAGACGATTTTCGGACGTGACCGACACCTGTCTCTTATA10.8403361344537815No Hit
GTANTGCAGCTGGTCAATATCAAACGTCGGACCTACGCCGGCGCCCAAGA10.8403361344537815No Hit
TTTAATTAGTGATGGTCTTTGGTTTTCTATAATGTATTAAATATCTGGAC10.8403361344537815No Hit
GCCTGATTCGCTGACGATGGTAATGTCTTCCTGGTATGCTTGTACAGCGG10.8403361344537815No Hit
GACTTCTACATACCAAGTCGTAAGCTCGCGATCGAAATCAGTCCGTCTGC10.8403361344537815No Hit
GGTTCTGATAATTCAGATCCCCAAGCGATGTTAAAGTTACGAGCAATTTC10.8403361344537815No Hit
GCAAGGACTACCCGGCCTGGGCGCCGTATGCCTGGCTCGCGGTTGTCTCC10.8403361344537815No Hit
GCCCTTTGCCACGTCGCCCAGCAGGACGAACAGTGCCGCAGCCTTGCCCT10.8403361344537815No Hit
ACTCATGACCAAAATCCCTTAACGTGAGTTACGCGCGCGTCGTTCCACTG10.8403361344537815No Hit
CCTCGCCGAACGCCTCCGCCTCCACCGGGACGGCCGCCGCCGCGCCCGAC10.8403361344537815No Hit
CTCCTCGAGCGCCTGATCGGCGCCGGGTCCGTTTTGCAGATCAAGCTTAT10.8403361344537815No Hit
GAGCTGGAAGAACGTCTTGAAGTGCTTCGCAACGACAATAAACTGCTTGA10.8403361344537815No Hit
CTCTAGCGCGTGGCACGATATTGCCCATGAAGCGCCTATCCGTCCTGCTC10.8403361344537815No Hit
GTCTTCTTCATGGCTATCCACTAACTCGCCCGCGGGCAACCGAGTCTGGC10.8403361344537815No Hit
CTTTAAAAGAACGGGTTCAGGCAAGCGGTATCGGCAACTTCCGTAAGGTG10.8403361344537815No Hit
TCTCTTCTCTCGCCACCCCCTGGTTTTCAAGGCCGAAAGCGACATCATCT10.8403361344537815No Hit
GAATCGGCACATTATGTTTTTTCGCGTATGCAATCTCTTCTTCACGGCTC10.8403361344537815No Hit
GTAAAAGAACGGTCAGCTAGTCTTAGAAATACACACTAGCGTCTTCAGTT10.8403361344537815No Hit
AAACCTAATCAGTCAGTTGTGTCTCACGTTATTAGCAAGTTTTCAAAAGA10.8403361344537815No Hit
GTCTTAATCGAATGAGCCTCGTCGCTCAAAACGTCAAGCTGAGTGGCCGC10.8403361344537815No Hit
TGTTTGATCTATTAAATCTGGATCTGATAAAACCATAATATGAGCATCAA10.8403361344537815No Hit
ATTTCTTATTGAAGAAAAATTATGCAGTAGAAGCTACTCCAGGTAATTTA10.8403361344537815No Hit
GCTTTGCGGTACAGTGCCGTATCACTACTGAAGATCCGCTGAATGATTTC10.8403361344537815No Hit
GTCTCGCACCTCGATGCCGGCGCGCTCACGGCTCAAACCTGTCTCTTATA10.8403361344537815No Hit
GCGCAATGGTCGCCCAGGAAAAGTCGGTTTTGGCCCGCGTGAGCCCGGCC10.8403361344537815No Hit
GCTTGTACACGTCCTTATCGTCGTCCATGTTGATGGAGCTGAGTCCCTGC10.8403361344537815No Hit
GTTCTCTTGTTTCACTGCCGATGACGCTCTGGAAATCTCTCACAATCTGC10.8403361344537815No Hit
TGCGAATGGTTCACGCCGTGTGATAACGACGCAACCACTTGGCTCGACGG10.8403361344537815No Hit
CGCTTCTGCTTGGAAAAGTCCTGGTACTTGATCATCTTCGCCTCGCCGTC10.8403361344537815No Hit
CGCTTACACCCCGCACACCAAGTTCGAGGGTTCCGTCTACGTCCTGAAGA10.8403361344537815No Hit
GCTTAAAAGCTTCCTGATCCAGCGCCTCCGGCTCCCCTGTTTCAGAAATC10.8403361344537815No Hit
CGGCTTACCTGTGGAGCCGGAGGTGAAGATGATCCAGCAGTCGTGGTCCG10.8403361344537815No Hit
TACCAGGATTTAGCTTTAAATCTGAACGGGTTCTAGATTCAACTGGTGCA10.8403361344537815No Hit
ACCCTAAGGAGAGAAATAAATATCACGTCACTCCAAAAGGTAAAGAGGCG10.8403361344537815No Hit
GGCCCTTGAGGCCTATGAGAATGGAGCAGCTGGGGGCGGGCTTTTTGATC10.8403361344537815No Hit
ATAGAATTGCTGAATGGTTTAAAAACCGTCCGAAGAAAGAGAAAACGAAG10.8403361344537815No Hit
GGCCACGCCGCTGAACTCCTGCGGTCGCTGGCAGCCCACAAACGCCGCGA10.8403361344537815No Hit
ACCGCGTATCGACGGATGCTCCGCTCATCCACGCCAACGCCGAGAACGCC10.8403361344537815No Hit
CCACAAGACCGATTCTGCTCGTTATCGGTGCGAGTGCCGCAAGTATAGTG10.8403361344537815No Hit
GAGGAGAAAAAGAATGAAAATAACAATTTGGTCTGATTTTGTGTGCCCGT10.8403361344537815No Hit
TTCTAGTTGTTCGTTATAGAGAGCCGTTATTTGGTAAAAAAGAAAACCAA10.8403361344537815No Hit
CGTTTCTGGCGAGACGTATTCTAGATGACATTTCAACAGGTATTTCTTTT10.8403361344537815No Hit
CCAATACCGCAAGCTCTTCCGCTTTAACCAGAGCATCCGCAGACTTATTC10.8403361344537815No Hit
GGTCAGTCTGGTCACTCTGATTGTCACGCTACCGTATATCCTCGCAGACG10.8403361344537815No Hit
ATGATGCGCTCTTCCGACTCCACCTCGGGGCGCGGGTATTCGCCCGCGGC10.8403361344537815No Hit
CTGTCCTCCCTTGGACACAAGGTTGATTTTTTCGGCCTGCTCCTCCTTGG10.8403361344537815No Hit
GTTTACCAATTCGCTGTGAAAAACTTGCGGACGAGAGCGCAGAAGCGGAC10.8403361344537815No Hit
CGCATGAGCACGCCGCGCATCTCGTTGAACTCGGTCGTCTTGTCGCGCAG10.8403361344537815No Hit
GATATCGATCGTCATCATCCTGCCGCTCGGCCGCCGGATGGGCAGAATAT10.8403361344537815No Hit
GCTTGAAACCGGCCAGGTCGATTTTCTGCCAAATGTTCCTTCTGAGCATA10.8403361344537815No Hit
GCTGATTGTTCAGCTGTCTGCTAAGCCGAGTTCTCGTTTCACACGAATTG10.8403361344537815No Hit
CCAGGGGGATGTGTGGAGTGATTATGACGTGGCTCACAGCAGTGCACCGC10.8403361344537815No Hit
GTCTGTTAATATTTCCCTGAATTTCGTTTCCACTTCTTCTGTGCCCATCT10.8403361344537815No Hit
GTAGAGCACCTCGCGGCCCTTGCGCGACGAGGACACCAACCCGGCCGAAC10.8403361344537815No Hit
ACAACTGGCTGTTTACCTACCTGCAGCCACCACCGAATGCGCTTGAGCCA10.8403361344537815No Hit
CAATTTATCTATTGCATTTTTCCGGTGAGAAATTTCTGCTTTTTCATCTG10.8403361344537815No Hit
GTTATTAGCTGAAGCACTTTCAGCTGAGCCGACCCGTGAGGAAACACATG10.8403361344537815No Hit
ACTTACATCACCGCGTTGGCGGCCGCCGCGGCAAGCTTGGCAAAGTCCTG10.8403361344537815No Hit
GGTCATCCCCAGCCCGCCAAAAAGCAGGCCGAACGCCGAGGTAAAGGGCG10.8403361344537815No Hit
GATCTCAGCTTGATGATCGACCGGCGTTTCTAGACGAGCATCAGGACCCC10.8403361344537815No Hit
GATGAGGACGACAGCGAAGAATCTGCCAAGGGAGACGGCGCTGACGGTGG10.8403361344537815No Hit
GTAGTAGACTGGACAATAGCGCTGTGCTTTAGCGCAGGACGCGCAAGTGT10.8403361344537815No Hit
CGAGGAGGATCGCCCACTATGGCGAACTACACTGCTGCTGACGTCAAGAA10.8403361344537815No Hit
GCAGACGAACACCACGTTCTACATTACCCTCTTCAGTCCACAATTCTGAA10.8403361344537815No Hit
ACTCGGATGGGGACCGGTGACGTCAACCAGGTGACCAGCCAGCTTAAAGA10.8403361344537815No Hit
TTGGGACACCAATTCGTGCAAACATTAATCGTAAGTAGTCATTAATTTCT10.8403361344537815No Hit
TCTATATCATCAATGACACCACGTTTAATTTGGTCTACAATATCACGGCG10.8403361344537815No Hit
CGTGACGAAAGAGGTTGAATAGATGATTAAACTTGCAGTCGATACCGAAG10.8403361344537815No Hit
GTGCGCGTGTCCGTGAACAGCTGCGTTGCAGTGTCGAAATTCAGGCTCTT10.8403361344537815No Hit

[FAIL]Adapter Content

Adapter graph