FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003650354

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650354
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences119
Sequences flagged as poor quality0
Sequence length146
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGTATCCATAAGCTTTAAGCTCTGGATAGTGTGAAGTAATCACAACTG32.5210084033613445No Hit
CGTGGATGTCCGCCAGCCGGCGGAATCCGCTTGGCAGCAGACCCAGCACC21.680672268907563No Hit
GAGCAGCGCCTGTCCGGGTTTTTGCTGTGGCAGGCCGCGTACTCGGAGAT21.680672268907563No Hit
GCTCGGAGAAGCGCCGCCCGATCGCGCTGATCGGCCGGGACCCGCGTGTC21.680672268907563No Hit
TCGTACGTCCACGTGATACACGTGCAATGAAAATACCAACGAATGGGCTC21.680672268907563No Hit
GATCCAAACGTCGGAATTGTTGACGTACCAGATGAACGTTTAAACAAATT21.680672268907563No Hit
GTTCATGGCCATCCTGAACACCAAGGAGCATTTCCGGCCCGGCGCGTGGG21.680672268907563No Hit
TTACCCACTGTCCCAGGCATCAACCCACCAATATGCCATTCTAGGCGACG21.680672268907563No Hit
TTCGGTACCTGTGCTGCCGGTTTCGCTGCCGGTTTCTCGGCTGGCTTCGC21.680672268907563No Hit
CTCATCGCGTCCTCGTCGGTGCCGAAGCGCTCGTTCATCTCCTCCTGCGT21.680672268907563No Hit
GCTGAAGCGTAAGCAGCGCGCGCGAAAACGAACATAGACCGGGTCACAAC21.680672268907563No Hit
CTCAAAAATCATTTCAGGGTGTTCTATCTGGACATAACGGTAAAAGCTAT21.680672268907563No Hit
GACGAACATGTCCCGATTCTTTTGGCGATTATTCAAGTGGAATCAGGCGG21.680672268907563No Hit
GCGCAGTACCGCCAGCAGGTGCAGCAGTCCGTTCGCGGCATGCTGGTGTG21.680672268907563No Hit
ATACAAACGGCTATTTGAATCTTTATTCTATGAATAAAAAAACGCAGGAC21.680672268907563No Hit
GCAAACAACTTTTCCACTAGTAGGCTCCAATATCCCCGTCATTATTTTTA21.680672268907563No Hit
TCCGTTGATAGCTTTTCTAAATACTAATTCTTCAATAACTGGAGCAGTAA21.680672268907563No Hit
GTTGAAGAGCAGGCGTTTGAAGAAGCGGCAGTAGTGCGTGATCAGATCAA10.8403361344537815No Hit
TCCTAAGATTGTTGGTGCACCTTCAAGGATTGTAACATCCGTACCTAAGT10.8403361344537815No Hit
TCTTTTAATTTTTTAGCATCTTCAATTTCTTGTTGGCGTTCCGCTTCTGC10.8403361344537815No Hit
GTAAAATTGAATGGGACTCAAACAACTGATACCATAATTGCTAATTTGAA10.8403361344537815No Hit
CTATTGCAGCTTTGCCTGAGCCTCGGACCAGAGGCCCTCGAACTCCTCCT10.8403361344537815No Hit
AATAAAACCAACGCGCCGACTGGCGCTAAGAGGACTAGTCGTATCCAAAC10.8403361344537815No Hit
ATCCGGTCTCTGTCTGCAAAATCGGGTAAGGCCTTTTCAATCTGATCAGG10.8403361344537815No Hit
GAACGAGTACCTGCCGGACGGCGACCACGACGAGGAGATCGTGGACGACA10.8403361344537815No Hit
ACTTTGAAGGATGCCGTCAACGCAACACTCCGCCACTGGGTGGCGAATGT10.8403361344537815No Hit
TCGCGTTGACCGTGCTCACCTGCACGATGGTGGTGCCGGGGCTGTTGCTG10.8403361344537815No Hit
GTTCGCCACATCGATGAGCATGTGGATAACGCGCTTACCCCGCTGGTGCG10.8403361344537815No Hit
GTCTAAGAACTTGCGGCGCTCCGCCGGCTCGCCGGTGATCAGGCGCAGGT10.8403361344537815No Hit
GTCAGGTGGAGGGCGAATACTCCATAGACCGCACCCGCATCTTCGCCGCC10.8403361344537815No Hit
GGCGTCGCGCGACGGCGTGTTCTGGATCCAGGAAATGATGCCGCCCGAGA10.8403361344537815No Hit
ACGCGATCTGGACCGACGACGGCCTGCGGGTGCTCAAGCCTGCGCAACCG10.8403361344537815No Hit
CTTCTGTACAAGAAGACGAATACGCAATGGGCTATATTTCAGTAGGTTCT10.8403361344537815No Hit
GCGTGCGCCCGTTCACCTCCGCGATGAACGAGGCCACCACAACCCTGCAG10.8403361344537815No Hit
TCCAAGAGACGAGTTCGTTGTGGTGACGGGATTATCTGGTTCGGGAAAAA10.8403361344537815No Hit
TCGTTCAACGGGGAAGGTTATTAAAAGCCGACCCGGCAGAAAAGCAACAA10.8403361344537815No Hit
GCCTTAGCAATACCCACGCCATCCTTAGTAGTCTCGAGAGCGTCTCGACC10.8403361344537815No Hit
GTTCAAGGACCTGGCAGACGAGATCGCCGCGGCAGCCGCGGCGATCTCGT10.8403361344537815No Hit
GCTCAGCAGACCGCTGATCTCGAAGAAATTGGTCGAGGTTGCACATGAAG10.8403361344537815No Hit
TATTTATCCTCCTGATTTAAGGAGTTAGAAATTTCGAAAACGATTCTTTC10.8403361344537815No Hit
GTAAAAAGAGTACCAGCACCAATCAGGCCAACCGCGCACGCGGCTGCGAT10.8403361344537815No Hit
CAAATAGGGTTTTAAAATTTTGACGTTAATCAGTAAAACACCCTTCAAGG10.8403361344537815No Hit
ACATGAACGTGACCAAAAAGGCGGAGAAAGCAGGGTTTTCTTTTGTTTTC10.8403361344537815No Hit
CTTCAAGAATTCTAGCTGAAGAAACTGGTGCGAAGATGTATACGGCAGAT10.8403361344537815No Hit
GTGTCGGTCACGTCCGAAAATCGTCTTGCCCTCCGGGACTGTCTCTTATA10.8403361344537815No Hit
CTTCTAAGCTGAAGGTCGCGACGTCGAAGAATCCCCTCGAAAAGGAACTT10.8403361344537815No Hit
CGTCATCACCATCCTCATCGGCGGAACCGTCGGCGGATACATCGTGTTCG10.8403361344537815No Hit
ATATCAGCGTCACTTAACACGAGTTTATCTAGTGTGTAGAAGTTTAATAT10.8403361344537815No Hit
GAATGGATGAAATCCAAGGCGAATGTGGAAATGATGATTAACATGGCGAC10.8403361344537815No Hit
ATGAGGACGTGCTCGCGCAATTTACTGCGGAGATGAACGCAATCGGAGTT10.8403361344537815No Hit
TGGCTGCGGAGATACGCATACCCTGCTCGACAGTGACGGGCCGAGTGTGC10.8403361344537815No Hit
GATATTGGCATCGTTACAGACATTGCTGCACCACACCGCTTCAAGTTACA10.8403361344537815No Hit
GGAGATACATACCATCTACCCCTAAAACCACAGGGGATGGGACTGAGAAT10.8403361344537815No Hit
CGGCACCTCTTCCGGTTTAGGCAACGACACCGATTTCGCGCTGCTCAACG10.8403361344537815No Hit
CTTTGTCCAGTGCAACTGTCACTTCTTTTTGAAGTATGGGGTGGATGAAG10.8403361344537815No Hit
CCTTTACGGTCTGTCATTGCTTGTAAATAAGTTTTCTCGGGTTCATATTT10.8403361344537815No Hit
GGGGCCGATGCCGTTTCGCCCGTTTCCGTGCGACCGGTAGGCCCGTGCGG10.8403361344537815No Hit
GATGAGATCAAACGTTTTGAAGAAGCGATTGAAAAATCAAAAGCTGAACT10.8403361344537815No Hit
GTTTGAGCCGTGAGCGCGCCGGCATCGAGGTGCGAGACCTGTCTCTTATA10.8403361344537815No Hit
TTTCAACAGTCTCTTCTTCAGCTGGAGATTCAATAATCGGTTCATCTTCT10.8403361344537815No Hit
CCGTAAATGTCATTCAAGTAATCCAGCCCAAAATTAAATTCATGGTTGCC10.8403361344537815No Hit
CAATAACCCTCTAGCATCCATGATGTCTGGTATGGGAGTGAATGCAGATT10.8403361344537815No Hit
GCAATAACCCATACGAGCAGGAAGCGAGGGAACGGTGGGGTGATGCGGCA10.8403361344537815No Hit
GGTGAAGGTGTTGGATTCGAAGACCCGGCTAGAGATTCTGCTGCTGTTGG10.8403361344537815No Hit
ATACTCATCAACGGCAATAAGCTGACCCAGGAAAATATCGCCAATTACCG10.8403361344537815No Hit
GCCGAAGCGTCGGTCGTCGTTGTCTGGGTGGGGGAAGGGGCCGCCGGCTT10.8403361344537815No Hit
GGTGTCTTCCGCGCTAGTGAGCGACATGTCAAAGCCGGCAAACGGGGCGT10.8403361344537815No Hit
TGATGATGCTCCCTATGCTCAGCATGTTCGTGATGAGAATTGCTTTTTTG10.8403361344537815No Hit
AGGTAAGCTATTTTGGAATTCATTGGCTAAACCTAATGCACTAATCATTG10.8403361344537815No Hit
GAAAAAAAGGATCTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGAC10.8403361344537815No Hit
GAGTTAAGATGCTTCGAGTCGGGAAACGGCTCAACGTAGACGCAAGCGTT10.8403361344537815No Hit
CACCCGTCTCGCGGGCCGCCTGGACGAGGTGGATGTCCGGGCGAACTCGC10.8403361344537815No Hit
GCAGTAAAGAATTCTCGAGAGTGCTTTGTTGGAATCTCCGAGCCTATTAA10.8403361344537815No Hit
CGCTAAAGCCTTGCGGTCCGACTGGGCGAAGCGAGAAGAATTCGTAGTCA10.8403361344537815No Hit
CTTCAGAATTGTGGACTGAAGAGGGTAATGTAGAACGTGGTGTTCGTCTG10.8403361344537815No Hit
GTGCGATACGCAAACTCAATATTCTTGCCCGGCTCGAGGCCCTTTTCGTT10.8403361344537815No Hit
CTCAATCCCTGAACAAAAACCCATTTCCCGCATCATTTCAAGGTCATAGT10.8403361344537815No Hit
GCTTTACCAGGTATCGCAATAGCCTTTATGCTGATTCAGGTGAAGGCAAC10.8403361344537815No Hit
TCTCTGCGGAATAAACAGCGCCATCATCGTCACTAAAATAAAGACCGGCA10.8403361344537815No Hit
CGCCTACCTGGAGCAGCTGGACGAGCAGTTCCGCGCCCGCTGGGGTGAGC10.8403361344537815No Hit
AGCATCGGCTTCGTGATGCTTTCCCAAGAAGCGTCATGCAAATCGTAGTC10.8403361344537815No Hit
AATTTCAACAGATGAAAAAGCAGAAATTTCTCACCGGAAAAATGCAATAG10.8403361344537815No Hit
CTCGTTAATCTCTTGATCAGTGAGAGCCATAGTTTCAGCCTTTCTTCTGT10.8403361344537815No Hit
TCCGCATCCTCTATGGCGGCTCAGTCAAGGCCGACACGGTCGCCGAGATC10.8403361344537815No Hit
GCCAGACGGTGCCGGCCATGTACACGCAGGCGAGGGTCAACGGCAGGGCT10.8403361344537815No Hit
GTGCTGGAGTTCAGTGATAAGAAGAGGATCATTTTCACATGGGACGCCGG10.8403361344537815No Hit
CCATGTGGTCAACAGCACGCACGCCAGCATGACCAGCGGGAACTCCAGCC10.8403361344537815No Hit
TTCCGAACACAGAAGTTAAGCTTCTTAGCGCCGAGGATAGTTTAGGTTTG10.8403361344537815No Hit
CGCTTGGTGTGGAGCCCATTGAAACGTTTAATGTCTCGTGCGTTTATATT10.8403361344537815No Hit
AGCCTGGCCCGCGTTTACGGCGCTGAGCTGACCATCATCTGCGCCCACTA10.8403361344537815No Hit
ATGTACACCCTGCACATCGATGACCTCAACGGCACCGATCGCGACATCGA10.8403361344537815No Hit
TCATAGTACGGTGAAATTTCAGCACCCTGGAAACCGTCGCCGGCATCCAG10.8403361344537815No Hit
GGTCATAATCATAGCCGAATTCCTGTGCAGACTCATCATATCCGAAAACT10.8403361344537815No Hit
CTTGGAAAGGCATTCCTTCAGCCCATGCTATTAGAGCATCATAAGAATGA10.8403361344537815No Hit
GACGTCGACGGTGACTTGCTTCTGGGTGGCGAGTGCCGTGCCCGCGCCGC10.8403361344537815No Hit
CCCTCTGGCAGGTTAACAACACCGGTAACGTCAGTGGTACGGAAGTAGAA10.8403361344537815No Hit
CCCCAGTCCTGCAGCGGGTCCGGGAGCAGCGTGGCATCGGCCGCCTCGGC10.8403361344537815No Hit
AAATCATCTAGCACGTCCTCCACGACATCTGGCTCAAACTCGGCTTTGAC10.8403361344537815No Hit
AAACACCTGAAAAGACAAGGAAGCCGAAACTGTTCACGAAGAAATACAGG10.8403361344537815No Hit
CACTTCCGCTGTAACGGTTGTCTCTTCAAATTCATACGGCGGCAGCAGAA10.8403361344537815No Hit
GCGTTGTCGTAGAAGGCTGGTCGGCCTGTTTCCTGGTCGGCTTTGTTGTG10.8403361344537815No Hit

[FAIL]Adapter Content

Adapter graph