FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003650420

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650420
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length146
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAGGAACCATGTGCCAAGTTGCAGGGTGGGGCAGGACTCACAATAGTGC318.75No Hit
GTATCAACGCAGAGTACATGGGGACATTCTCCCCAGAGGCCGAGATGCGG212.5No Hit
AAGTTGTGGCTGGGTGCAGTGGCTCATGCCTGTAATCCAAGCACTTTGGG212.5No Hit
GCTTCCCATTGTGGTGTTATCACTGGCAGGCTCTGGGACATCATGCAAAC212.5No Hit
GGCTGGCGCTTTAGTTGAACCCAGGTACCTTTCTCTTTGGCTTCTTTCTT212.5No Hit
GTCCCAGAGATGGTCAGGCCCAGAGGAAGGTTAGTCTCATGCCTGCTGTT16.25No Hit
GTGCTGGGATTACAGGTGTGGTGGCAGGCGCTTGTAATCCCAGCTACTCA16.25No Hit
GGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAAACCTGCCTCTA16.25No Hit
GAGCAGGAGGGGCCGGAGTATTGGGACCGGGAGACACAGAAGTACAAGCG16.25No Hit
CCCTGCTGAAGAGGCTGCTCCAGGAGCACAGCGGCATCTTTGGCTTCAGC16.25No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)