FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003650549

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650549
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2943
Sequences flagged as poor quality0
Sequence length146
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TATCAACGCAGAGTACATGGGGAGGACCCGTGTGCAGCAGCGGCGGCGGC60.20387359836901123No Hit
GGGTCACCCTGTCATGGTGCAGCTCCTCTGTCTCCCGGTCCAGCTTGGCC60.20387359836901123No Hit
CCCTACTGCTGCTACACAAGACCCTGAGACTGACCTGCAGGACGAAACCA60.20387359836901123No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA50.16989466530750932No Hit
CCTATGCAGTGGCCACAGGGGACGCCCTGCTGGAGAAGCTCTGCCTACAG50.16989466530750932No Hit
GTGGAGAGTACACAGCAGAGGAACTGTGCATCAGGGCTGCACAGGCATGC50.16989466530750932No Hit
CTCCAGCTCCTTCTCCCGCCGGGCGATCTCCTGCTCCTGCACTGCCACCT50.16989466530750932No Hit
CACCAGACTTGCCCTCCAATGGATCCTCGTTAAAGGATTTAAAGTGGACT50.16989466530750932No Hit
GCTTGGTATAGCTATGCTCTGAGACTCCATTTTCCAACTACTCCTGCCTC50.16989466530750932No Hit
GCCACAGGTTGGAGAGCATCACGCGGTTGACCCCGCTCATCTCGGGCGCG50.16989466530750932No Hit
ACCCTAAGGAAGAGGAGTTGTACGCATGTCAGAGAGGTTGCAGGCTGTTT40.13591573224600748No Hit
TAAAACTACAGGGGGGATTGCAACAAAATCCTTTTAAGCATGGCCTGGCA40.13591573224600748No Hit
TCACTACCTGCAGTTTCGTGGCTCCCTGGAACAGCCTGAGCTTAGCTCAG40.13591573224600748No Hit
CCCTTGCCGCTGCCACCGCACCCCGCCATGGAGCGGCCGTCGCTGCGCGC40.13591573224600748No Hit
TCTATGAGGGCTATGCCTTGCCCCATGCCATCATGCGTCTGGATCTGGCT40.13591573224600748No Hit
GTCTGGCGGCAGCCATCAGGTAAGCCAAGATGGGTGCATACAAGTACATC40.13591573224600748No Hit
GGTTACCACAGTGAAGAAATCTTCAGTACGTCTTCCAGGGTCGGATCAAA40.13591573224600748No Hit
GTCCCGGCCAGCCAGGTCCAGACGCAGGATGGCATGGGGGAGGGCATACC40.13591573224600748No Hit
CTCTATGCCTCTGGACGCACAACTGGCATCGTGCTGGACTCTGGAGATGG40.13591573224600748No Hit
ATTCAAATGAGCATCCTAGTCACCGCGTTTAAAATGAACCTGCCGGCTGA40.13591573224600748No Hit
CTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGC40.13591573224600748Clontech Universal Primer Mix Long (96% over 26bp)
AGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACA40.13591573224600748No Hit
CCACGATCGTCAGCCAATGGATCGTGGGCAATGGACACGCAACTGATCTC40.13591573224600748No Hit
GGCAGGCGCCCCACACCAGGGCCCCCAGCTGCCGGCTGCCTCGGGCCAGA40.13591573224600748No Hit
GTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTT40.13591573224600748No Hit
GGATGAAAGAACAGTGCGGAAGATCTGTGCTTTGGATGACAACGTCTGCA40.13591573224600748No Hit
AAGAAACGCTGTATTTTCCGTGCACGGGACACGGTCAACTTGTCTTCCTC40.13591573224600748No Hit
ATCGTACCCAGATGTGGGATAAGCAGAAGGAGGTCTTCCTGCCCTCGACC40.13591573224600748No Hit
TACTTATTGAGGTTGAACTCATGGGTCACGTTTTCTCCATACTGTACAAT40.13591573224600748No Hit
GTTCGAAGACGATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGA40.13591573224600748No Hit
CACCAGACTCGGATCATTTTATCACAACTTCCAGCTGCTATCATGGTATT40.13591573224600748No Hit
AAGAAGACCCGTGTGAAGCTGCCCTCCGGCTCCAAGAAGGTTATCTCCTC40.13591573224600748No Hit
TCTCTGGGCAGCGGAAACGTTCATTTCCGATGGTGATCACTTGCCCATCA40.13591573224600748No Hit
CTTATGGCTTCTGTCTAAGCACCTGAACAGAGGACTGAAACCTCCACTGC40.13591573224600748No Hit
GTGTTGGCGTACAGGTCTTTGCGGATGTCCACGTCACACTTCATGATGGA40.13591573224600748No Hit
ACCAACACTCCAGCTGAGCTGGCCTTAGCCCCAGCCCCTTCTGAGTTTTC40.13591573224600748No Hit
TGTCTAAGTACGCACGGCCGGTACAGTGAAACTGCGAATGGCTCATTAAA40.13591573224600748No Hit
CCACAACATCTAGCAGAGAATCACCAACTTTTCCTTTGGTTGTTAATGTT40.13591573224600748No Hit
CCCCTGCATATCTTCTCAGCAATAACTCCATGGGCTCTGGGACCCTACCC40.13591573224600748No Hit
GCAATAATGAAGGGCAAGATGAAGTGAAAGGTAAAGAATCGTGTGAGGGT40.13591573224600748No Hit
GTAATAAATAGGATTATCCCGTATCGAAGGCCTTTTTGGACAGGTGGTGT30.10193679918450561No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG30.10193679918450561Clontech SMARTer II A Oligonucleotide (100% over 25bp)
GTCCTCGGGCACCTGTGCGTGAATCGCTGCCGCAAGGCTGGGCCAAGTTA30.10193679918450561No Hit
CCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCT30.10193679918450561No Hit
GACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAA30.10193679918450561No Hit
CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACT30.10193679918450561No Hit
TGATAACACAGAGTTTCAAGGCAAACGAATGCACGTGCAGTTGTCCACCA30.10193679918450561No Hit
GAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGAC30.10193679918450561No Hit
TCCACAAGCAATGAGTGCCACTCTGCAGTTTGCAGGGGATGGATAAACAG30.10193679918450561No Hit
CCTGTATTCATAAAGATGGCACTCTACTGTTTTCTCCTTTGCATTGTTTT30.10193679918450561No Hit
GTACAGGGGGAAGGTTGCGGGGGCCGCAGAGCCGGACGAAGACGGAGGGC30.10193679918450561No Hit
ACAATGAGCTGCGTGTGGCTCCCGAGGAGCACCCCGTGCTGCTGACCGAG30.10193679918450561No Hit
GTCCCAGCCATGTATGTGGCTATCCAGGCGGTGCTGTCTCTCTATGCCTC30.10193679918450561No Hit
TCCGCACACCCTGCAGGTCCACGTCCAGCACACAGATGCGGTTCATGGCC30.10193679918450561No Hit
GCAAGTGATAGAACTAGGACTTGACACGGGTCTGTCTCATATGAAAATCT30.10193679918450561No Hit
GAAATAAACCCGTGTACTTCTTATTGTTAGCACAACATCACCAGAAAACG30.10193679918450561No Hit
GCTCTCGAAAGTGGGCTATATTGGGCTTCACAATATTCAACACTTTTGTT30.10193679918450561No Hit
GTATTTGCACTCCGGAGGGGCAATGATCTTGATCTTCATGGTGCTGGGTG30.10193679918450561No Hit
GGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTGGTGCATG30.10193679918450561No Hit
AGGCAGAGGTTGCCTCCGAGAAACTGACCGCCTCCGAGCAAGCCCACCCA30.10193679918450561No Hit
CATCTGTTTCAGCAGCTGTGTCCACATCTTCTACCTCCTGGGTCATCTGT30.10193679918450561No Hit
CTCCGGCCCCGGCCGGGGGGCGGGCGCCGGCGGCTTTGGTGACTCTAGAT30.10193679918450561No Hit
GCTGCTGGTATTTGCCAACAAGCAGGACATGCCCAACGCCATGCCCGTGA30.10193679918450561No Hit
CTATCAAAGATGCTGTTCATGGCCATCAGGTGGGGCTTGAACAGGGATTC30.10193679918450561No Hit
GCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAAT30.10193679918450561No Hit
GTGCAGATGTTCATTGGAGATGGTGCCAAGCTAGTCCGGGATGCCTTTGC30.10193679918450561No Hit
GCTGCAGTGATGGCGCCAACCCGTGGCAGTCCCAGAGCTGGAGGCAGGAG30.10193679918450561No Hit
AAAAGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA30.10193679918450561Clontech Universal Primer Mix Long (96% over 26bp)
CTTCACCACCACGGCCGAGCGGGAAATCGTGCGTGACATTAAGGAGAAGC30.10193679918450561No Hit
GACTACAGGTGCCCACCACCACGCTCGGCTAATTTTTGTATTTTTGGTAG30.10193679918450561No Hit
TGTCCAAGTACGCACGGCCGGTACAGTGAAACTGCGAATGGCTCATTAAA30.10193679918450561No Hit
GGCTGTATGTCCACCCGGATTCTCCTGCCACAGGAGCCCACTGGATGCGG30.10193679918450561No Hit
GACTGAGTACTCTTCCTAATCCCACTACAATCTCCGCCGCCCAGGTTCCA30.10193679918450561No Hit
GCCCCAGGTGTTCTGTGCCTTCCACACCAGGTCGGTAGGGGGGCTGTGGG30.10193679918450561No Hit
CTCTGACCTGGTCACAGCCAGAGACACTTGGAAATCCTCCATCTCCCCGG30.10193679918450561No Hit
ACCTAAAACCATAAAAACCTTCGATGCGAAAATCTAGGCAATACCATTCA30.10193679918450561No Hit
CCCTGAAGTACCCCATCGAGCACGGCATCGTCACCAACTGGGACGACATG30.10193679918450561No Hit
AAACAGCTCTGTGTAGAGCATGTACACAGCCTTGTTGTCCCAGGGGTTCT30.10193679918450561No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA30.10193679918450561No Hit
GTGATGAGCTGCTCAGGGTGGAAGAGCTGGCGGTAGGTGCCAGTGCGAAC30.10193679918450561No Hit
ACGTCACACTTCATGATGGAGTTGAAGGTAGTTTCGTGGATGCCACAGGA30.10193679918450561No Hit
TTTTTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCGATGATGAG30.10193679918450561No Hit
GGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACCCAACACGGGAA30.10193679918450561No Hit
GGCCAGAGGTCACCGTTTCTCCTTCCTGTGTGCTCCAGTGGCTTTTGAAG30.10193679918450561No Hit
GCTTTGGAGCATGCCATAAATTGGGAGTCTTTATAAGGGCTACAGCAGGA30.10193679918450561No Hit
GGATGGAGGGGTAGTACCCCTTCTCCACGTTATGACCGCATGTCCAGTCG30.10193679918450561No Hit
GGTCTCAGGAGCTCCGTTTTAGCGTTTATATATCCCAATTCCAATTAAGC30.10193679918450561No Hit
GTCGTGGCGCATCTGCGCGGTGAGCATCGGGCTGATGGCGCTCCCGGTGT30.10193679918450561No Hit
GAGTCTCACTGACTACCTCATGAAGATCCTGACTGAGCGTGGCTATTCCT30.10193679918450561No Hit
AGGATATTGTGATCGCGTATGGACAGAGTGATGAGTACAGCTTTGTGTTC30.10193679918450561No Hit
GCTTGTAATGGGCTCCACAGCGGGGGCATCGCTGGGCCTCGCCTTTGTGC30.10193679918450561No Hit
GTTCCAAGCCTTAGGGGATGCCGCTGACATCCGGTTCGTCTACACCCCCG30.10193679918450561No Hit
CCTACCCAGATACCGATGTTATACTGATGTGTTTTTCCATCGACAGCCCT30.10193679918450561No Hit
GATGTGGCCCCTGCGGCACCACCCGATGCCAGATTCCCTGCAAAGTAGCG30.10193679918450561No Hit
CCCCGATGCTGTACTTCTCCTTGGCCCAGGCCAGCTTCTCCCGGATGGCG30.10193679918450561No Hit
CGCCTGCCCCTGCCGGCACGGCTCCCCCTCCTGGACCAGTCCCCCGCGAG30.10193679918450561No Hit
GTCTAAGTACGCACGGCCGGTACAGTGAAACTGCGAATGGCTCATTAAAT30.10193679918450561No Hit
CCTCCTTACTGCCCTCTCCCAGTTATCAGAAAGACTGCTGGTCCCAGAGT30.10193679918450561No Hit
TGTCAATCCTGTCCGTGTCCGGGCCGGGTGAGGTTTCCCGTGTTGGGTCA30.10193679918450561No Hit
ACCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTC30.10193679918450561No Hit
GAATAACGCCGCCGCATCGCCGGTCGGCATCGTTTATGGTCGGAACTACG30.10193679918450561No Hit
ATTATAACAACGGTGCAATCTCAGCTAAACCGACGCAGTTTTGCTCCTTG30.10193679918450561No Hit
CCACGAGGATGATGGGCACATCATCTGTTTGCCGTGCACGCCGCAGCTGG30.10193679918450561No Hit
CATTAACGGTGCTAAAAATGAAAATTCTAACCCAAGACATGACATTCTTA30.10193679918450561No Hit
GGCTGGAAGAGTGCCTCAGGGCAGCGGAACCGCTCATTGCCAATGGTGAT30.10193679918450561No Hit
CGCACTGACTTGGCACCCCGGCCTATGGCATTGGCCTTCCAGGCATGGTA30.10193679918450561No Hit
GCTCAGAACCCCAGCCTCTTTGTAAAGATTCTCATCGTGGAGATCTTTGG30.10193679918450561No Hit
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACC30.10193679918450561No Hit
GTCTACGAGTGGCACGAATCGCACGGATGTTTGGTTAAAGAACAGTCGCA30.10193679918450561No Hit
GGGGGGATGCGTGCATTTATCAGATCAAAACCAACCCGGTCAGCCCCTCT30.10193679918450561No Hit
GTGTTGGCTTGGAAAACACACACACAAAGAAGATACCTCACGCTTAGTAT30.10193679918450561No Hit
GTCCAAACCTTCTTCTCTCCTGTCAACAGTGGCCAGCCCCCCAACTATGA30.10193679918450561No Hit
TCTAAGGGCATCACAGACCTGTTATTGCTCAATCTCGGGTGGCTGAACGC30.10193679918450561No Hit
TTCCAGGGCTGTACGGTCGCACTGAACTCGATAGGTCTCAGAAAAACGAA30.10193679918450561No Hit
CCCGTCGCACAGGGAGAAGGACATTCATTCTAGAGGCCAGTGGCCCCAGC30.10193679918450561No Hit
GACAGCGTGGTGAGTCATATGCGTCTTGGGGGCGTCCGTGCGCTGCAGCG30.10193679918450561No Hit
ATGCTATGTGTCTCAGGATTTTTATAGAGACATGGATATTGCAAAGTTGA30.10193679918450561No Hit
GGCCACATGTGGTGGAGAAATGTACTTGTTTCCCTTTAGTTTGTTCAGAG30.10193679918450561No Hit
TGTTGTAGCTGAGTAAGGTGGTCATATCCTGGCTGCTCAGTTCAAAGTCA30.10193679918450561No Hit
GGGTCCGGAGGCTCACCAGTTTCATTAGCATCCGTGGGAACATCAGTCGG30.10193679918450561No Hit
AACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGGCGCCGG30.10193679918450561No Hit
GCCCTGGGCAGTGGGCTGGTCAGCCGGGTGTTCCCAGACAAAGAGGTCAT30.10193679918450561No Hit
CATGAGGGCTTGGCACATCCAACCCTTGACCAGCTCCCTAACCCTGTCCC30.10193679918450561No Hit
GGTCTCACCATGTTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGAT30.10193679918450561No Hit
TTGTGCTGGGTGCCAGGGCAGTGATCTCCTTTTGCATCCTGTCGGCAATG30.10193679918450561No Hit
GGAAAGAGCCGGTGAAGGGGCAGAACAGGCAGGTTCCCTCGACCCAGGAC30.10193679918450561No Hit
AGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACGCACGG30.10193679918450561No Hit
GCGAGCTGCGCCAGGCCAATCGCCACCCCAAATACAAGACGGAACTCTGT30.10193679918450561No Hit
GGCACGAAGTGTCTTCCGATGCAGTGTCCAGTCATGACCTCGATCCATCG30.10193679918450561No Hit
GGCCGGATCTTGTCCTGGCCACCCACGTCCCACACAGTGAAGCTGATGTT30.10193679918450561No Hit
CCCGAGAACAGCCCTGTGGTGCTTTGGCTCAATGGGGGTCCCGGCTGCAG30.10193679918450561No Hit
CGCTCTCATAGTCCGCGATCACCTGTGGCTTCTCATTGATTTTCGTGGCC30.10193679918450561No Hit
GAATAAGGCAATGTGTTAAGCACTGGCATACAAATGCAGCTAAAGGTGCT30.10193679918450561No Hit
CTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTT30.10193679918450561Clontech Universal Primer Mix Long (96% over 26bp)
TTAGGATATTCTCTAGTCTTCACGTTTCTGGGGAACAGCTCAGCCAGTTG30.10193679918450561No Hit
CCGAGCTCAATGGTGCGCAGCAGGTTCTCGGCTGTGTCGTTGAGGCCTGG30.10193679918450561No Hit
CAGTTACACAGGCTAAGGCAGCTGCTGGAGCAACCCCAGGCAGAGGCCAA30.10193679918450561No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG30.10193679918450561Clontech Universal Primer Mix Long (96% over 26bp)
GTCACTGGGCTCCACCTCGAGGGTGATGGTCTTACCAGTCAGGGTCTTCA30.10193679918450561No Hit
GTCATGACCTCAGTTGTATGTCAGAAGATGGATGCTCTCCAAATACATAC30.10193679918450561No Hit
GGAGATACCAGCACCCAGCCAGTTACTTCATGCTTTTCTGGGCCACCCCG30.10193679918450561No Hit
GAGCGTGGCCACCGATGGCCCAAGCAGCACCCAGCCTGCCCTGCCAAAGA30.10193679918450561No Hit
CCGTGATGCCTTGCACTGGCCGCGTTCCCGAAACCACCTGCCACCCAGGA30.10193679918450561No Hit
AAGCCCAATGGCTCCTTCTCCATCACTGCCTCCTACAACTTCCACATCTT30.10193679918450561No Hit
CCAACTCTGGAAGTTAGCATTGATAACAATACTGCCATCCAGATCATGGA30.10193679918450561No Hit
CCATGTATGTGGCTATCCAGGCGGTGCTGTCTCTCTATGCCTCTGGACGC30.10193679918450561No Hit
GATCTCCTCTGCCACCTGGGGCAGCTTCTCTAGCAGCATGTCCAGCTGAG30.10193679918450561No Hit
GTACTGAGCTCTCCAAAGACTGGGCAGGCAAAGTCCCTCTGGCCCCCTCT30.10193679918450561No Hit
GTACAGGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAAT30.10193679918450561No Hit
GCTTGGGGTAGTCCATCTTGGTGATGAAGTCAGAGGCTGTTTTGAGGGCA30.10193679918450561No Hit
CCCCACGGCTCCACTTCCTCATGACCGGCTACACCCCTCTCACTACGGAC30.10193679918450561No Hit
CTCCTGCCTCACTCATTTACACCAACCACCCAACTATCTATAAACCTAGC30.10193679918450561No Hit

[OK]Adapter Content

Adapter graph