FastQCFastQC Report
Tue 7 May 2024
EGAF00003650550

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650550
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2943
Total Bases429.6 kbp
Sequences flagged as poor quality0
Sequence length146
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCTTGGGCTGCCCCCATCTCTCCCAACAAGGTGTACATATTCTGCGTAG60.20387359836901123No Hit
CAGTAAAGATGTCAATACCAACCAGATGGACCTTGGCGTGACCGTGCTTG60.20387359836901123No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA60.20387359836901123Clontech SMARTer II A Oligonucleotide (100% over 25bp)
GTCTCTAGCAGCTGCCGCTGAGCCGCCGGACGGACGCTCGTCTTCGCCCG60.20387359836901123No Hit
GTACATGGGCTCGTGATGGGCGACGACGAGGAGGTGAGCGGCCTGCGCGG50.16989466530750932No Hit
CTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCAT50.16989466530750932No Hit
GCCCGAGGTTATCTAGAGTCACCAAAGCCGCCGGCGCCCGCCCCCCGGCC50.16989466530750932No Hit
TTATAGGTGCGTGCCACCACCACCTGGCTAATTTTTGTATTTTTAGTGGA50.16989466530750932No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG50.16989466530750932No Hit
GGCCTGCAGAGTCTTCTTCTGGAACAGGGCCTCGTGGCTCCAGTACAGGG50.16989466530750932No Hit
GGAGAAGCAGAGGCCAAGAGAGATGCTGGGATCCGGGAAGCTAAAGCCAA50.16989466530750932No Hit
GGGCAGGATTCAGGCTATCTGGGACCGCAGGGACTGCCAGGTGCACAGCC50.16989466530750932No Hit
GCCTTTTGGGTCCTGTATCCCAATTCTCAGAGGTCCCGCCGTACGCTGAG50.16989466530750932No Hit
AAATCATACTGTCCCTGAGCAAACAGATACTCCAGTGAGCTGGCATCAAG50.16989466530750932No Hit
CTCCCACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGG40.13591573224600748No Hit
GAGCAAGAGAGGCATCCTCACCCTGAAGTACCCCATCGAGCACGGCATCG40.13591573224600748No Hit
TCCTCACCGAGCGCGGCTACAGCTTCACCACCACGGCCGAGCGGGAAATC40.13591573224600748No Hit
GCCTCGTGCAGCCCTGGGCACCGCCCCTGCCCTGCCCTGACCCCTTGGCC40.13591573224600748No Hit
ACCTCTCACTGTTCCCAAGGGCTGCACGGAGCCTGCTGAGTCTCCAACCC40.13591573224600748No Hit
CTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGC40.13591573224600748Clontech Universal Primer Mix Long (96% over 26bp)
GAGTACATGGGGGTCCTCGGCGGCCCGGCCGGCCGGTGGCTGGACCACGC40.13591573224600748No Hit
CTATAGATGTGGACATTTGCATTACACAACTGGAATCTGTTCTGACGTCA40.13591573224600748No Hit
GAGTTGAATGAGCACAGCCTAGTGATCGATACACTGAAGGAGGTAGATGA40.13591573224600748No Hit
CTCCTCTGCAACGGACTGAAGGCTTCGAGCAAACTTTAGCTGGTTAACAC40.13591573224600748No Hit
GCCATCATGCGTCTGGATCTGGCTGGCCGAGATCTCACTGACTACCTCAT40.13591573224600748No Hit
CCGTAGGAGTAATCCGAGTTGAGATGCCACTCCGGGTGCCTCACCGTGTA40.13591573224600748No Hit
CCTTAGCGGTAGTAACTTTGTGTTATGAATCACATGAAAGCATGGAATCT40.13591573224600748No Hit
GAATGATGTTTGGTAAATCTCAAGAGGCGGAAAGAAGTGCAGAATACTCT40.13591573224600748No Hit
GTGAAAATATGGGCAACAGATGATGGGAGGTTGTTAGCTACCTTAAGAGG40.13591573224600748No Hit
GTCTTGGTTCCCCGGAGACGTCCAGTCCGGCGGGCAGCAATGAGACCCAC40.13591573224600748No Hit
TGACCCAACACGGGAAACCTCACCCGGCCCGGACACGGACAGGATTGACA40.13591573224600748No Hit
GGAAATGGGTAGAAATCACAGGACAATCTCTCTTCCCACCAAAAAAAAGT40.13591573224600748No Hit
TCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGA40.13591573224600748No Hit
TCCTGGTAGAATTGGAGTGCAGACAGATTTGATGGTCACCGGGCGTGTGG40.13591573224600748No Hit
GCTTAATGGTCAGATCATCTGTTTCAATGGCTTCGTCAGTATAGTTCTTC40.13591573224600748No Hit
CCATTGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCTCCT40.13591573224600748No Hit
ATCTATGTGCCTGCTGATGACTTGACTGACCCTGCCCCTGCTACTACGTT40.13591573224600748No Hit
ATACGCGATGGATCGAGGTCATGACTGGACACTGCATCGGAAGACACTTC40.13591573224600748No Hit
GGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT40.13591573224600748No Hit
GACCTCACCAGAGTTAGAGGAAAGAGTAGGTGCATTTTTGGCATCAGGGA40.13591573224600748No Hit
CACATAGGGCAGCAGCCGCACGCGTCGCGGGTCTCGCCCAGCAGGCAGCC40.13591573224600748No Hit
GGTCCTTCCTGATGTCAATATCACACTTCATGATGCTGTTGTAGGTGGTT40.13591573224600748No Hit
GGCAGTGGGTGACAGTGGAAGGTCCCCAGGTGGTGGTGGGGAGCTGGAGG30.10193679918450561No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT30.10193679918450561No Hit
CCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCT30.10193679918450561No Hit
ACACAGTTTCTCCTTGATGTCCCGGACAATCTCACGCTCAGCAGTAGTAA30.10193679918450561No Hit
CCCCGATCCCCATCACGAATGGGGTTCAACGGGTTACCCGCGCCTGCCGG30.10193679918450561No Hit
GGATAGCACAGCCTGGATAGCAACGTACATGGCTGGGGTGTTGAAGGTCT30.10193679918450561No Hit
TCCTTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAATAGATTGCAAA30.10193679918450561No Hit
CGGGGGCCCAGCGCCTCATTCCCAAGAGAGCGCGGCCTCCCCCAAGGGTG30.10193679918450561No Hit
GTGGATGAGGAGGGCAAGTTTGTCCGGCTGCGCAACAAGTCCAATGAGGA30.10193679918450561No Hit
GCCTCTGCCTCATGATGCTTTTGGAAATCACGGGGTATTCTTTGCTCTGC30.10193679918450561No Hit
CCATGGAGGAGACTCTGGCCTTATCTGTAGGGACCTAAATTTTTTAAGTG30.10193679918450561No Hit
GGCACCCAGATTTTTTCTTCCCACGTCTAGCTTGCAGAGCAGCTCTCGTA30.10193679918450561No Hit
ATTTATTGGTGAGTATTAAGAGGGGGGCAGCACATTGGAAGCCCTCATGA30.10193679918450561No Hit
GCAGATTGAGGAGCAGCGGGTGCAGGTGCAGGTGGTGGAGCGGGCCCAGC30.10193679918450561No Hit
GTGCTGCCATGTGCATCATCTCCACGGCGCAGCAGGCCAGGCCGAAGGTC30.10193679918450561No Hit
CCTTCACGCCAATGGCGCCTCAATATTCTTTATCTGCCTCTTCCTACACA30.10193679918450561No Hit
CAAGGTGGCGGTGCAGGCCGTGCAGGCCATGAACCGCATCTGTGTGCTGG30.10193679918450561No Hit
ACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACC30.10193679918450561No Hit
GTACATGGGGGCGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTC30.10193679918450561No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA30.10193679918450561No Hit
TCGTAGCTCTTCTCCAGGGAGGAGCTGGAAGCAGCCGTGGCCATCTCTTG30.10193679918450561No Hit
CAGGAGGAGCTATGAATATTCATGTAGGTGGTTGCAGTCCATGCTTATTG30.10193679918450561No Hit
GGGTAGAAGAGTATCAAATTTAAGCAAGGTCCAATGCTGCTCTTCTGTGT30.10193679918450561No Hit
CCGTGTGGACTTTATGGAACGCAGCCCCAACATCTCCTGGCTCTTTCACT30.10193679918450561No Hit
GGGCCGGGGAGGCCATCCCTTATCCAAGATCACAGGGAACTCCGGGGAGA30.10193679918450561No Hit
CGGCCGGTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCC30.10193679918450561No Hit
GCCTATATCAGAAGGATTAAAGAGTATTTCCGGAACAGCAAATCTCTCAT30.10193679918450561No Hit
CGTGATGGACTCCGGTGACGGGGTCACCCACACTGTGCCCATCTACGAGG30.10193679918450561No Hit
CCGGTGGGGCGCTTCTTCACGCCCGCCATCCGCCAGGGCCCCGAGGGACT30.10193679918450561No Hit
CCTCCCTTTCTGTGGATGAGGCGGGACAAGGCCGGCCCCCTGGCTGGGGC30.10193679918450561No Hit
GTACATGGGATGACCCACCAATCACATGCCTATCATATAGTAAAACCCAG30.10193679918450561No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC30.10193679918450561No Hit
CGGTAAGTATTAGTTTCAAACAGAACACTAAAGAGAAAAGTTGAAGCTGC30.10193679918450561No Hit
GGTACATAGTGGTGCCCCCTGATAGGACATTGTTAGCATAGAGGTCCTTC30.10193679918450561No Hit
GCCTTGCACTGGGCCCCATTGAAGTCATCTGTGCAGCGGGCCAGCTCCTC30.10193679918450561No Hit
ACCTTATACCAGCGTTATGAGATCAAGATGACCAAGATGTATAAAGGGTT30.10193679918450561No Hit
CGGCTGAGGAGAGAGGAGGCGGCGGCTTAGCTGCTACGGGGTCCGGCCGG30.10193679918450561No Hit
CCTTTATGCCTTTGTCCGTCCACTTTGGCTCTGACTGAACTTACAGTCAC30.10193679918450561No Hit
GGCTGATGGTTTCGATAATAACTAGTATGGGGATAAGGGGTGTAGGTGTG30.10193679918450561No Hit
GTGTCCGGCACAGAAAGAAGGTGTTGGTGTCCTGAGTGTGTCCCTTAAGG30.10193679918450561No Hit
TCCCACCTCTGCCTCTCATGTTGCTAGGACTACAGGCGTGCACCACCACA30.10193679918450561No Hit
CTGCCATTGTTTCCCCGGATTCTTTTGCCATGTGTTAAGAGAGTGCTCCT30.10193679918450561No Hit
TCCATAAACCATGGCGTAGCGTTCGCAAAGTCTGTAGTCATCACAGGCTT30.10193679918450561No Hit
ACTCAGACGAGAGCGTTTACAAGGTGCTGCTGCTGGGGGCGCCCGGCGTG30.10193679918450561No Hit
CCTGCCCAGCTCATTTTTGAATTTTTAGTAGAGACAGGGTTTCACTGTGT30.10193679918450561No Hit
CTCGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGG30.10193679918450561No Hit
GGTGCCCCCTGATAGGACATTGTTAGCATAGAGGTCCTTCCTGATGTCAA30.10193679918450561No Hit
GGACTCGGCCTAGCTCTCTCCCGGGTCTCTCCGGGCCTCAGTGGGGAGCC30.10193679918450561No Hit
AATCTGAAGAGTGCTGTGACCGCTGCTTTCCTCATGCTCCCCGAAAGCTT30.10193679918450561No Hit
TATCTGGGACCCAGGATCGCTCTGTGAGCAACTTGGAGCCAGAGAGGAGA30.10193679918450561No Hit
GACCCATTGGTTGTGGTGGATAAGGTGGGTATGGGGCCGTTGGACCAGGG30.10193679918450561No Hit
GTTAATAATTCTGGCAATTCGTCTCCACACTAGAAGTCGACGAACAACGA30.10193679918450561No Hit
CACTAGGAAGATGGGTTGAGGGTGGAGGTGGGGGACACAGGTGCGCAGCT30.10193679918450561No Hit
GGCTGGGGCAGGCCGGGTGCAGCAGGCACCGGGGCGACTGTCGGGCGCCC30.10193679918450561No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGA30.10193679918450561No Hit
TCTGTGTAGACTGTTCATCATCACCTGCCACGAACACCACGAAGACCGCG30.10193679918450561No Hit
GTTCCGGGGGGAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGA30.10193679918450561No Hit
GGGATACACCACGACTCTTCCGTCAAAGCCTGGGGGATACAGAAGGGGCT30.10193679918450561No Hit
GGCCAAATCCAAGCAGGCTATCTTAGCGGCACAGAGACGAGGAGAAGATG30.10193679918450561No Hit
TATCTAGAGTCACCAAAGCCGCCGGCGCCCGCCCCCCGGCCGGGGCCGGA30.10193679918450561No Hit
ACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATTCCCATGACCCG30.10193679918450561No Hit
GGCGCTTCCTCCGCGGGTACCAGCAGGACGCTTACGACGGCAAGGATTAC30.10193679918450561No Hit
GGAGGGCACTGAGCCCGAGGCGATGCTCCAGGTGCTGGGCCCCAAGCCGG30.10193679918450561No Hit
TCTACATGCCAATGACACAGAACCTTTCTTGAGCTGCTCATCTTCCTGTG30.10193679918450561No Hit
CCCTGGAGGTGGGCAAGGTGATCCAGCAAGGTCGGCAGAGCAAGGGGCTT30.10193679918450561No Hit
GGTCATGACTGGACACTGCATCGGAAGACACTTCGTGCCGACACGAAGCA30.10193679918450561No Hit
GGATGAAGTTGGCCAACTTCCGTTCCCGGATCCTCTGCAAGCTCTTGTGG30.10193679918450561No Hit
CATTTAAGATCTGTTTGGACGCGGAGGATAATCCTGTGAATTGCTAATAG30.10193679918450561No Hit
GTATGCGTGTTTGTATGCATGCATGGACCAGGCAAACAACCAGTTCAACT30.10193679918450561No Hit
CTTTTTGCTAGCATCTCGCACGGCAAGAGCGATTGCCGAGCTTAGAGCGT30.10193679918450561No Hit
GACCCAACACGGGAAACCTCACCCGGCCCGGACACGGACAGGATTGACAG30.10193679918450561No Hit
CTAAGAAGTTGGGGGACGCCGACCGCTCGGGGGTCGCGTAACTAGTTAGC30.10193679918450561No Hit
GGTGAGGTGACTGGCCATGGCTGTATTCTGGACTTGTGGCAGCTGGGACA30.10193679918450561No Hit
TCCAAAGGCATCGTGGTGACCGCCTACAGCCCCCTCGGCTCTCCTGACAG30.10193679918450561No Hit
GAGGATTTCTCTGAGTCGCTCTCCAGAGGGGGTCACCGCCGCCGTGGGAA30.10193679918450561No Hit
AAAGTGGACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTA30.10193679918450561No Hit
GGCCAGGAGGTGTTCGTACCCTTCAGCGCGGTGCTGCCCATGGTGGCGCC30.10193679918450561No Hit
GTTCAGGCACTTGGCGGTGGAGGCATAGGCCTGGGCCCCGGTCACGTCGC30.10193679918450561No Hit
TTCTTCAGCTGGCACAGACCCTGCTGTTTCTTCCACCTCCGTTTTCTGCT30.10193679918450561No Hit
CAGAGACCCTGTTCCAGCCATCCTTCATCGGGATGGAGTCTGCTGGCATC30.10193679918450561No Hit
TGCTTCTGGAGACATCTCGGAGGTACAACCCTGGGAGTGAGAGTATCACC30.10193679918450561No Hit
ACTCTTAGCTTGTCGGGGACGGTAACCGGGACCCGGTGTCTGCTCCTGTC30.10193679918450561No Hit
GCCTGGTGCAGACCATGGCCAAGTCGGCGGTGCGGACCATGGGCACCTCG30.10193679918450561No Hit
ACATGTACCTGGTCATTGATGATGAGACCAAGGAGGCTGCCATTGTGGAT30.10193679918450561No Hit
TCCCGGGGATGCACGCAGGAGCTTCCGGGCATCAGGGGCCTGCCCCTGGC30.10193679918450561No Hit
GAGCTAGAGAGGCTGGAGGAAGAGCGAAAGCAGATGGAAGCCTTCCGGCA30.10193679918450561No Hit
GAATAGGGAACAGGGGACACACCACCTTTCCCTTCCACCAAGCCTTGGTT30.10193679918450561No Hit
ACAATAGTCTGTGTGGCTACAAGGAGCCCCTGCTGTCCTGCCTCATCATC30.10193679918450561No Hit
GTGATGACCTGGCCGTCAGGCAGCTCGTAGCTCTTCTCCAGGGAGGAGCT30.10193679918450561No Hit
CTACAACACATAACACATAACGTAACCAAATCACTTAACACCAGCAATAA30.10193679918450561No Hit
GGTGTAAGCGGCGTGTGCGTGTGCAAGAGCCGCTACCCGGTGTGCGGCAG30.10193679918450561No Hit
GGCTTAGAGCGTTCTCGGATCCTCTCTTGGACTTTAGCTCTCCATCTCTG30.10193679918450561No Hit
GCAGCAGCCTCTGAGGTGTCCCTGGCCAGTGTCCTTCCACCTGTCCACAA30.10193679918450561No Hit
GCAGGAAAGAGAGAATGGCGAAGTAAATGCCCCAGATGAGTGCCATCGGG30.10193679918450561No Hit
TTTCCGAGGAGGGAAGAAAGTCAGTGAGCACAGTGGAGGCAGAGACCTTG30.10193679918450561No Hit
CCACCACACCTGGCAAATTTTGTATTTTTGGTAGAGACGGGGTTTCACCA30.10193679918450561No Hit
CGGAGGAGCCTGCTAGTGATAGCACGATTTTTAGCAAAGCGGTCTGGAAG30.10193679918450561No Hit
AGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGA30.10193679918450561No Hit
GGCTGTGGCTAGGACTTCAGGAAGGGACGGGCACAGGTGGGAAGGGTCCT30.10193679918450561No Hit
TTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTCC30.10193679918450561No Hit
TCATTAAGCATGCTGACAAGCACACTGCCTAGTACATCCCTCCTTGACCT30.10193679918450561No Hit
GAATAAACTGATAACCACCAAGCAAGTCCTTAATAGGCACTCACTGTTGC30.10193679918450561No Hit
GTAGTAGGCAAAGTAGACCAGGGAGTTGTCATTCTGCTCATAGGAGGAGA30.10193679918450561No Hit
GCCCAAATCATCTGCCATGTGGAAAAGACTTCCTACATTGTGTCCTCTTG30.10193679918450561No Hit
ATTATGCTATGAAGGGAGCTGGGACAGATGATCATACCCTCATCAGAGTC30.10193679918450561No Hit
ACCCCGTGCTGCTGACCGAGGCCCCCCTGAACCCCAAGGCCAACCGCGAG30.10193679918450561No Hit
GGAGAGGGGCTGACCGGGTTGGTTTTGATCTGATAAATGCACGCATCCCC30.10193679918450561No Hit

[OK]Adapter Content

Adapter graph