FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003650583

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650583
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length146
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAACAAGTCCGACCTGCTGGCGGCAATGTCGGGACAGGTGACGCCGGCGC211.11111111111111No Hit
GCTCACCTGCTTGGTCTGAAGGGCCTGCACCGCCTTGGCCATCGCCAGAT211.11111111111111No Hit
GTTCATCACCTGATCCATATCCACGCGGTTGGAACGCGGCACAATCACCA15.555555555555555No Hit
GTTGCAGGCACTGCTTGGCACACCGGCCACCGCCTATGACGGCGCGTTCT15.555555555555555No Hit
TCCCCGTACCGCACAGGAAGGCTACCAACTCGACGATCGGCGTTCAGGCT15.555555555555555No Hit
CTGCCGCACCGCAGGTGAAGACCCAGGCCCCCGGGTACTACCGCGTGATG15.555555555555555No Hit
CAGTCAAGGTCAGCCATCGCCCACGGGACGTAACCCCCCTGGTCCCGTTT15.555555555555555No Hit
GGAGAGTACACATTCCCGTCACACCGGAGAGAACCCTGACCACGACCTTG15.555555555555555No Hit
CCTCGCCGCCAACCGCCAGGCGCAACGCTGACATGGCGATCTTCAGGACT15.555555555555555No Hit
AGTGATACCTTCTTTCTCCAGCACATACATTGCCGCGTCAACGGCTCTCA15.555555555555555No Hit
CGGTTCGCCATCACGATGAAAAACCTTAAAGCGAAACAGCGCCCCATGAT15.555555555555555No Hit
CGCTACCAGATCGGCCAGGTCCAGGGCATCGTGCTGGCGGTAGTCGTCGA15.555555555555555No Hit
GGGTGAGTCGACCCCTAAGGCGAGGCCGAAAGGCGTAGTCGATGGGAAAC15.555555555555555No Hit
GCTTACATGAGGTAACCTAGAATATTAAAGTTCATAGAGACAGAGAGTAG15.555555555555555No Hit
GTTTGGCCACTGCTGGTAATAATTGCCGGCTGGTAGTCTTACGATTTGTC15.555555555555555No Hit
CTCCAGATCGCCGGCCTCACCGACCCGTCGGAGACCCCCGCACCCCCCGG15.555555555555555No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)