FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003650584

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650584
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length146
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCAGCGAATAATTCACCCGGCCGACGCCGTAGAAGCGGCGGCTGATCGGC211.11111111111111No Hit
ACTGGGCATCCCGCAGATTTGGCCGATGCTGGCGACATCCTGTCGGAGAT211.11111111111111No Hit
GGTGGATCTGGGTGTTGGTCTTTGCCGGTGTGCTGCTTGTCGTGGAGATC15.555555555555555No Hit
GTGTCTAACCGCATTGCTCCATCCTCCTGCGCTGCCTGATCTTCGAGCAT15.555555555555555No Hit
GCGCCTGTCCCGCCCATTCGATCGTGGCAGGAGACGATTGAGCAAGCTTG15.555555555555555No Hit
TCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAA15.555555555555555No Hit
GATGCGGCCAGTCTGTGGCGGTGGCGTAGTGGCCGAGGCCGGTCACGTAT15.555555555555555No Hit
GCTGGATATCGTGCAGGGGCCGGATTATCCGACTGAAGCGGAAATTATCA15.555555555555555No Hit
GAATTGGTCAGCATCTGGACAAATCGTAAGACTACCAGCCGGCAATTATT15.555555555555555No Hit
ACTGATTTCAGCTCCACGAGCAAGTCGCTTCACCTACATATCAGCGTGCC15.555555555555555No Hit
GCACCTCACCCGGGTGCGAAGCCGGACCCCACGACATGATCATCGATTGC15.555555555555555No Hit
GTTGTGCAGCAGCTTGTCGAATGGCAGCTCGGTGGTTCCGTCGCTGAGCG15.555555555555555No Hit
GGCGCGGATTATACGCAGGCGCGCCACGACTGGCTGTCACGGCAGACATC15.555555555555555No Hit
GATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCT15.555555555555555No Hit
GTCTCTAGGACTTTTCGTCTTGTAAAACTAAAACAACTATTAAACAACTG15.555555555555555No Hit
ATGCCCAGTGAGGTGAATCTCGTTACCGCGTACCAAGATGTCGGCGTCAA15.555555555555555No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)