FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003650670

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650670
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length146
%GC64

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCCAGTGATTGATGGGTTCGGGCTTCGGCGCTTTCGTCGGCAGGCCAC314.285714285714285No Hit
GAGGCGGCCAGGCCTTCGACGTCGGCGGACCGCTGGATCGCGCGCAGGCC29.523809523809524No Hit
GCCGCCGACCAGCGACTTGTCGGTATCGGCGTTGCCGGCCTTCGCAAGCT29.523809523809524No Hit
ACGTCGCCCGACTTGACCTGAGCCGACGGCACGTTCAGCGCTTGACCATT29.523809523809524No Hit
GTTCTCGTCCTTGCTGATATGGGCCAACACGCGCAGCTCGATTTGGCTGT14.761904761904762No Hit
GATCTACGTGACGCACGACCAGGTGGAAGCGCTGACCTTTGCCGACGAGG14.761904761904762No Hit
GCTACGGCCGCTGCAACCGGCTTAGCGTGCTTTATTGTCCGTTTGCTGAG14.761904761904762No Hit
GGCTACCACTCCTCAATCTGGTCGAACGGTTTGGCCGGCGGCTGGTTGTC14.761904761904762No Hit
GCCCCCTTGAGCCGGCGCACACCGGCGTCGGAGTTCAGCAGAACGATCAG14.761904761904762No Hit
CTGGTGTTCCGCCCGGATTCTTCGCTCGGCGCAGCGGGGCTGCTGTCGGT14.761904761904762No Hit
CCGTAGATGGCGTGCGCGCAATTCGCCAGCCGCCGCGCTACCAGCGACGA14.761904761904762No Hit
CCACCGAGGTGGAGGCCATCTACCGCCGCCTGCTGGTCGCCCAGCTGCAT14.761904761904762No Hit
GCGGAAGCCTTCGCGATGGATGCGTGACGGGGATGCGGTGCCCGGTGGTC14.761904761904762No Hit
GGCGTTGGCGATGCTGATGCCGGTGGCTGTACCAGCTGCACCCAAGGTCG14.761904761904762No Hit
GTCGGGCACAGCCTGGGCGCCAACGTGGTTTGCCTGTACGCCGGTATCCG14.761904761904762No Hit
GCATCGCCCGCGCCGCTGCAGCCGTCCCCGACGCAGCGGACATCTACGAA14.761904761904762No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)