FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003650811

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650811
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82
Sequences flagged as poor quality0
Sequence length146
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCTACTCGGATCCCCACCTGACACTAACCAGAGTCAGCACAGGCCCCGA33.6585365853658534No Hit
GCTCAGGACCGCGCCCCCCGCGGCGCCGCTCGCTGGCCTGTACTACGGCA33.6585365853658534No Hit
CCATGATACAGGGGAGGATCTTAGGTGGCAGAGAGGCAATATCAATCCTT22.4390243902439024No Hit
CACCTACCCATGCAGAACATGAATCCTCTTTTTAGAGAGCTTTAGAAAGT22.4390243902439024No Hit
GAGTACATGGGTAGAGGCAGATCCCTGAGTTCAAATCCCAGTCTCTCTGC22.4390243902439024No Hit
GCTGTAAAGAGGGGCGTTGAGTCCGTCCGACTTCACTGCCCCCTTTCAGC22.4390243902439024No Hit
TCAGATGCCTTTGCAGAAAGAGATGCCAGAGGCTCTTGAAGTCACAAAGG22.4390243902439024No Hit
CCCCCACGTCGCTGTCGAAGCGCACGTTCTCCTCCTGGTCTGTTCTGTGA22.4390243902439024No Hit
GACCTGTTATTGCTCAATCTCGGGTGGCTGAACGCCACTTGTCCCTCTAA22.4390243902439024No Hit
CCCGCAGAATCTGCGTGAAGAGCTTGCCCACCTCGTTGAAACTCTGCCGG22.4390243902439024No Hit
GATCAGAAGGGTTTTCCATGGTCCATGAGTCCATCAGAGCTCAGATCCCC22.4390243902439024No Hit
GAGACCATACACCGTGATCCTTATTGAGAGAGCCATGAAGGACATCCACT22.4390243902439024No Hit
AACCCGGAGCGTCCCCTGCGAGCCGGGGGTGTGCGCAGTGGCCTACCCCC22.4390243902439024No Hit
GTCTGAGACCTCGTGTAGCATGTTGTGGCACCGTGATCCAGTATATGAGC22.4390243902439024No Hit
GGGGGGATGCGTGCATTTATCAGATCAAAACCAACCCGGTCAGCCCCTCT22.4390243902439024No Hit
TCTCTGTACTCATGGAGAGCCTCTTCTTCCAACTTTTCAAGCAGGCTTTT22.4390243902439024No Hit
GTCTTCCAGGGCCTCCTCATCGTGGGGCAAATCATCATCTGAGGAGAGGT22.4390243902439024No Hit
AGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTC11.2195121951219512No Hit
TCGACGGGCACATGGTTAACCTGGACAAGTACCGGGGCTTCGTGTGCATC11.2195121951219512No Hit
GGAAAATTTAGGGTAGTTACCGCGGGTACTTGTGCAAATTTGAGGGAAAG11.2195121951219512No Hit
ATCTTGATCTCTGCATCCAATCATGAACAAGGTTCTCTGATGAAGAGGGG11.2195121951219512No Hit
GTGCGTGTGTGTGTGTTTGTGAGCATGGGTGTGCCCTTGGGGTAAGCCAG11.2195121951219512No Hit
ACTCTCTGCTGTCCCGCAAGATGCGGATGCTGCTGGCGCTCCTGGCCCTC11.2195121951219512No Hit
CTCCAACACAAGGCTCCAAGACCTAGGCTCATGGACGAGATGGGAAGGCA11.2195121951219512No Hit
GAGTACATGGGGATCTCCATTGCGCAGCGCTACGGCGACCCGCAACTCCG11.2195121951219512No Hit
CTCACACTCTTATCCATCTCCCTCCACACTACCCATGGGCAGGTGGATCC11.2195121951219512No Hit
GCCTGCAGCATTGCCGTGGATGCCACCCTGAGAAAGAAAGCTGAAAAGTT11.2195121951219512No Hit
GGCAGGGAAACTGCTGGTGAATTCTGGAGACCTCGGCTGGGGGGCAGCTC11.2195121951219512No Hit
GGTCATTGACAATGGCTCCGGCATGTGCAAAGCTGGTTTTGCTGGGGACG11.2195121951219512No Hit
GCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAAGGATTTAAAGT11.2195121951219512No Hit
AGATAGAACCTTCCAGAAGTGGGCAGCTGTGGTGGTGCCTTCTGGAGAAG11.2195121951219512No Hit
TCTCTACACCGTTCCCATCCGGGAACAGGGCAACATCTACAAGCCCAACA11.2195121951219512No Hit
CGGTGCGCCGAGATGGCGCCACTGCACTCCAGCCTGGGTGACAGAGAGAG11.2195121951219512No Hit
CCGTGTCCCTCTCTCTCTGGGTCTCTGTCCCCCTCTCTCTCTGGGTCTCT11.2195121951219512No Hit
GGTCAAGATTGACTTTGAAGATGTGATTGCAGAACCAGAAGGGACACACA11.2195121951219512No Hit
ATGGCGGATAAGGAGAAGAAGAAAAAGGAGAGCATCTTGGACTTGTCCAA11.2195121951219512No Hit
GTCCCATCCCCTGCAGGCCTGGTCTCCACGAGCTCCGTGTCCTGGGTCTG11.2195121951219512No Hit
GCCCTCACTAGGGCCTAGGGAACCCAGGAGCAAATCCCACCACGCCTTCC11.2195121951219512No Hit
GAGGAGGAGGAGTACTTTGTGGCCCAGGGGCAGCAGTGACCAGCCAGGGC11.2195121951219512No Hit
ACCTTCAACTCCATCATGAAGTGTGACGTGGACATCCGCAAAGACCTGTA11.2195121951219512No Hit
CCCCACAGACGAATACCTGGAGGGCATGATGAGCGAGGCCCCGGGGCCCA11.2195121951219512No Hit
CTGTTTAGGTTGCTTTACATTCTCTTCCCAGCCCCAGATCTCCAAATACA11.2195121951219512No Hit
CCTACAACCAGGACAACGAGACATTAGAGGTGCACCCACCCCCGACCACT11.2195121951219512No Hit
GCGGACGCTGCGCGGCTACTACAATCAGAGCGAGGCCGGGTCTCACACCC11.2195121951219512No Hit
GATAAATGCACGCATACCCCCAGAGAACGGGGTAAGAGCCCGTCGGCATG11.2195121951219512No Hit
GGCAGAGAAAAAAGAATAAAGTAGAGGTTCTCAAAGTGCCATCCCTGGTC11.2195121951219512No Hit
AGCTTAGACTGTCGTTCATGTTAAACTCACAGTCGACAACAGCAGGTGGC11.2195121951219512No Hit
CTCCAGCTCCTTCCTCTTGTGCTCAAACTCGTCCTTCTCGGCCAAGGTGT11.2195121951219512No Hit
GAGATGGGGTTTCGCCATGTTGGCCTCGAACTCCTGACCTCAGGTGATCT11.2195121951219512No Hit
TGTTGTGATCTCGGCCCACCGCAACCTCCGCCTCCCTGTTTCAAGCGGTT11.2195121951219512No Hit
GCGAAAGGTATTTAGCATTCCAGTGTCGTGCTGGCCAATCAAACACCATG11.2195121951219512No Hit
TGTATAGACAGTGCGCGTATCATATAGGATGCGGCGATCTCATACAGCGT11.2195121951219512No Hit
GAGATGCACATAGTACATGAGAAAGAGAAGGGGACATCGAGGAATGTGAA11.2195121951219512No Hit
GTAGAGAGCAGCTGGGGCATCTGCAGAGGGCTCATTTAAGATGACATCAT11.2195121951219512No Hit
CCCTCAGGAAGCTAAGAAATACTATCTCGGCAATAGGATTGTAGCCCAGG11.2195121951219512No Hit
GTGGAAGAGCTCCTCCACGAACTCCAGCAGGCCGATGGCGATCTTGGCCC11.2195121951219512No Hit
AGGTGCAGTGGCTCACTTCTGTAATCCCAGCACTGTGGGAGGCCGAAGCG11.2195121951219512No Hit
GGGTGGGCTGCCCTGCGGCCGCCAAGCTCACCACGGTCTGTGCGCACGCG11.2195121951219512No Hit
ACTCTCTGCTGTCCCGCAAGATGCGGATGCTGCTGGCGCTCATGTCCCTC11.2195121951219512No Hit
GAATTTATCTGAGTCTGCTGCTGTGAAGGAGATACTGAAGGAGCAGGAAA11.2195121951219512No Hit
GTCTTGGAGGGGAAGCGAAATCCTCAGTCTGACACCCGCTCTGCCTATGG11.2195121951219512No Hit
GGGTCACCCGGCCTCCAGCTGGCAGGATTCCCTCTTCCTGTTTCTCGCCA11.2195121951219512No Hit
TCCTTCTCCAGCTGCTTCTTGCCATCCTCATCCTGCCATTTCTTGCAGTA11.2195121951219512No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)