FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003650812

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650812
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82
Sequences flagged as poor quality0
Sequence length146
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATAGCAGAGCCTTGTCAACGGCTTTTTGAAAATCCATCAAAGTTCTAT33.6585365853658534No Hit
GCAGGGACCCGGGCGGCGCCGGCGGCCTAGCCGGAGATGCACGCGCTGTA33.6585365853658534No Hit
GCGAGAGGCTCTGAGGCTGCCAGAGTGGTTGTGTCTGTTCCTCCGGTAAG22.4390243902439024No Hit
GGCTCCAACCAGAAAAGCACACACGATGAAAACAAAGCTATGTAGTACAT22.4390243902439024No Hit
TACCGCTGCTGCACTGATATGAGCCAGTGCTGCTGCTCTCTACGGAGTGT22.4390243902439024No Hit
GACACGGACAGGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTG22.4390243902439024No Hit
TGGATAGGCAGTGCGCACAGGTGAAGCGGCTGGAGAACAACCACGCCCAG22.4390243902439024No Hit
TGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCG22.4390243902439024No Hit
CACTCAGCATCTTGCTCTGTGCAGATTCAGACCGTGCTCTCCATTCCACT22.4390243902439024No Hit
AAACAGACACTTCATTGGCTCACCTCCACCCTATTACAGACTGAGTCTGC22.4390243902439024No Hit
CCCTGAGACAGAGTCGCTATCGTTATGTCTCCTTCCCGCGGTCAAGGCGA22.4390243902439024No Hit
GGCCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACCTGCCTTGGC22.4390243902439024No Hit
GTGGTCGCTGCTGTGATGTGTAGGAGGAAGAGCTCAGGTGGAAAAGGAGG22.4390243902439024No Hit
TCAGTGGCTTGAGCTTTTCTTTCAGCTTCTTGCCTTCATTCACTGGAAGG22.4390243902439024No Hit
GGCGTGTGCCACCACGCCCAGCTAATTTTTGTACTTTTAGTAGAGACGGG22.4390243902439024No Hit
GTACAAGGACAGGAAGGACAGAGCCTCAGTGGACTCCACGCAAGATAAGA22.4390243902439024No Hit
CACACAAGCTGGTGGTCGTGGGCGGCGGCGGCGTGGGCAAGAGCGCGCTG22.4390243902439024No Hit
GCCTGCGCCCTTCTACGAACCGGGCCGGGCGGGCAAGCCGGGCCGCGGGG11.2195121951219512No Hit
GGGGCACACAGAGCCCCTTCCCTTCCTCCTCGGGGAACAGCCCCGGAATG11.2195121951219512No Hit
ATATAGGACAGTCCACGTTTGCTTCTTATCGTAGAAAGAGAATAAGAAGC11.2195121951219512No Hit
GGTTTGTTCTCCTTGCCCTTGGAGGTGATGGTGAGGGTGTGCACATACAG11.2195121951219512No Hit
GTCGTGGTCAGATCCAAACTGCTGTGATTGTTGCCTGTGGTTTCTTCTGC11.2195121951219512No Hit
GAGGGAACTAGGGGTCGGCAGAAAGGATTATGGGTGGAAAACATTGGCTC11.2195121951219512No Hit
GGAGGGGCCGGACTCGTCATACTCCTGCTTGCTGATCCACATCTGCTGGA11.2195121951219512No Hit
TCGCAGCTGAGAGCGCTCCCCGAGTTAGCCCATCTCGATGCCCTCAGGGA11.2195121951219512No Hit
ACATCACGATGCCAGTGGTGCGCCCAGAGGCGTAGAGGGACAGCACGGCC11.2195121951219512No Hit
GAACCCGCCTTGCGGTAGCCATGGCAGCAGGCTCCGAGGCGACCACTCCT11.2195121951219512No Hit
GTACAACTGCCCAGATGTGCAGGAAAGAGAGAATGGCGAAGTAAATGCCC11.2195121951219512No Hit
AGCCAAGTCCGCGGGAAACCGAGCTGCTCGGGCCTGCCCTGCACCCCCCG11.2195121951219512No Hit
GCTGCAATCGCAGCCGGGAGCCCGCAGCCCGCGCCCCGAGCCCGCCGCCG11.2195121951219512No Hit
CTGTCCTGCTCCGCCTCAGAGGCATCATTTGACTTTTGCTCGGAGATCTG11.2195121951219512No Hit
ATCCTGAACGTCACGGCCACGGACAAGAGCACCGGCAAGGCCAACAAGAT11.2195121951219512No Hit
GGAGTGGGTAATTTGCGCGCCTGCTGCCTACCTTGGATGTGGTAGCCGTT11.2195121951219512No Hit
TAGCTGAACAATGCACAGCGAACTCATTTAGTTTCCATGCGCTTAACTGG11.2195121951219512No Hit
GTTCTCCTGGGGACCAAAATATCTCACCTCCCAGATCTAAGGGTCCCGCC11.2195121951219512No Hit
CCCAAGGTGCTGGGATTATAGGCGTGAGCCACCTCACCCGGCCTGAAATC11.2195121951219512No Hit
GCGTGGTACAACTGCCCAGATGTGCAGGAAAGAGAGAATGGCGAAGTAAA11.2195121951219512No Hit
GGAGAGGAGAAAGACATTCTCTCAATCCATCCTCCTTCCCCAGGGCAGAG11.2195121951219512No Hit
GCTCACTGCAGCCTCCACCTCCCGGGTTCAAGCAATTCTCCCGCCTTAGC11.2195121951219512No Hit
GTTCTCCCCTCTCATTATACACAGACCGGAAGGGAAAACCTATTCCTACG11.2195121951219512No Hit
GTGTCGGAACCTGCCTTCTTCCTGGTTCTGCACATTATCACCACTGCCCT11.2195121951219512No Hit
GGCTTGAACTCTCCTTATAGGAGTGTCTCCACATGCCAAAATCAGAGGAA11.2195121951219512No Hit
CATCAGAGCCCTGGGCACTGTCGCTGCACGCAGCCTGAGAGTAGCTCCCT11.2195121951219512No Hit
GCATGTGTCAGCCCTCGCAGCAGAGCGCTCGCTTCTGGCTGTGGGAGGGC11.2195121951219512No Hit
GTCGTGTCAAGCGCGTGTCATACGATTACAAGGCGTGGTCAGATATTAGA11.2195121951219512No Hit
ACCCGGGGCACCTCCATCAAGGAATTCCGGGAGATGACCCTCAGCTTCCT11.2195121951219512No Hit
AGCCTGGGGAGCCCCGCATGGACCGCGGCTTCCGCCGGGTAGCGCGGCGC11.2195121951219512No Hit
CTCCATGGGTCCGTAGCGCTTCACCACGCAGCCGTTCTTTTCGATGAGGA11.2195121951219512No Hit
GCCTACCATGGTGACCACGGGTGACGGGGAATCAGGGTTCGATTCCGGAG11.2195121951219512No Hit
GGGGGAAACAGACCCAGAGAGAGGAAGACAGAGACCCAGAGAGACGGGGT11.2195121951219512No Hit
GTTCGAGACTAGCCTGGCCGGCATGGGGAAGCCCTGTCTCTACTGAGAAT11.2195121951219512No Hit
GGCAGGGCCTGCTCACCGGTGTGAATAGTAGAACAAGACTTCCTCGATCA11.2195121951219512No Hit
CTTCTGAGAGAATGCCAGGATCTGTTCTCTGTGAAGCTGAATGGGCTCCC11.2195121951219512No Hit
GGCCAGTCCCAGGCTGGCCTGGTGCTCGCCCCTTGTGTGACCAGGCTCTG11.2195121951219512No Hit
CCTCACAGCCTTCCTGGGATACAAGGCTGGCATGACTCACATCGTGCGGG11.2195121951219512No Hit
GCATATGCTTCTGATGGTGTCATCTGCTCCTTCCTGTGGCCTCATCCAAA11.2195121951219512No Hit
CCTAATAGGAGGTGAATTAGATAGGGAAAAGATCGGGATGCTACTAGTTT11.2195121951219512No Hit
ATTTTGGACAGTCCACGTTTGCTTCTTATCGTAGCCAGAGAAGAAGAAGC11.2195121951219512No Hit
GTACATGGGTACCTGGTTGATCCTGCCTGTAGCATATCCTTGTCTCAAAG11.2195121951219512No Hit
CGACAGCTCACACCTGTAATCCCAGCACTTTGGGAGGTCGAGGCAGGCAG11.2195121951219512No Hit
AGACACGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGGCCTCA11.2195121951219512No Hit
GGATTACATCGCCCTGAACGAGGACCTGCGCTCTTGGACCGCGGCGGACA11.2195121951219512No Hit
GGAGCCTTCACTTGAGCCGCCACCTCCTTGCCATTCAGGGCTTCAACAAT11.2195121951219512No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)