FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003650877

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650877
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15
Sequences flagged as poor quality0
Sequence length146
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGCGGTGGCCCTGCAGAAGCCGGCGGTCACCATGGCCAGCATGGCGCCC213.333333333333334No Hit
CCTTAAGCACATGCTGATTATGGCCAAAGAAAGTGGCAGGCTTGAGGNTT213.333333333333334No Hit
GAGTGGAACGGCATGGAATGGAATGCAATGGAATGGAATGGAATGGAATG213.333333333333334No Hit
AGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAATCTG16.666666666666667No Hit
AAGCACTGTACATCACTCAAAAATCCAAAGAATCTCACAGTAGGCATGGC16.666666666666667No Hit
GCCACTGCACTCCAGCCTGAGCAACAAGAGTGAAACTCCGTCTCAAAAAA16.666666666666667No Hit
CTTTTTAAGAGAAGGAGATTGTCTACAGAATGCAAATTTCCCTGACAAGA16.666666666666667No Hit
AGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAGCC16.666666666666667No Hit
GCACTGTGGTCTGAGAGACAGTTTGTTAGAATTTCCGTTCCTTTGCATTT16.666666666666667No Hit
GCAGTCAACATAGCTAAAACTCCAGGTGGTTAAACCGAATCACACAGAAC16.666666666666667No Hit
AGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTACTCG16.666666666666667No Hit
GCCACTGCACTCCAGCCTGTGCAACAAGAGTGAAACTCCGTCTCAAAAAA16.666666666666667No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)