FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003650893

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650893
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length146
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCCTCAGTGTTTGGCTTCCAACTTGTTTTCTCCTACATCCTTGGAATC422.22222222222222No Hit
ACTAACAACAGGTAATTAAACACCAAATAACAGGGGAATGGCCATCAGAT15.555555555555555No Hit
ACATTACATCATATCACCCTCCTGACCACTTTTCTTCATCTCTTGGAGTT15.555555555555555No Hit
GGTGTGTGGATCACTTTGAGACCAGCCTGGGCCATATGATGGTCTTTCAT15.555555555555555No Hit
AACCAAAGTACTGCCAGCGCTGCAGCAAACAAGGCATTAAGCGCAGTCCG15.555555555555555No Hit
GCCTGGATCAGCGTGCGGCGCGGGTCTTCGAAACTCTTGGCATCGGCTTC15.555555555555555No Hit
GTCTAATAAGTGATTAATTGCAGTCCCTGAAAGAGAGAGGAAAGAGAGGA15.555555555555555No Hit
GGGCACGGGGCCCTAAAAAGGGAGACGGAGAAGAAGGGAAGGGAGGGTGA15.555555555555555No Hit
ATCATCTACAAGACTGCAGGCTGTTTCAGCCACTGTGAACTTTCTGCCCC15.555555555555555No Hit
GGTCAGTGCATTGGGTTTTTCAGACGCGGCCAGCCTAGGCCAGGTACTGG15.555555555555555No Hit
ATACCCAATAATGGGACGGCTGGATCAAATGGTATTTCTAGTTCTAGATC15.555555555555555No Hit
GCTGATAATGTGAATAAGAAATCTAGAACCTGATTCCTGGGAATTAACTG15.555555555555555No Hit
GTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGTGCCATCTTGGCTCAC15.555555555555555No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTGGTACCAAG15.555555555555555No Hit
GTATTTGTAGCAGTCCCATCTTTTGTTAGAGGTAAGCACTAGCACAAAGT15.555555555555555No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)