FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003650894

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650894
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length146
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGTCCAAAACTAAAATAGCAAAACAAAGAATTAGAGCTAATAAGGCAA316.666666666666664No Hit
GAATTAGGCGCTAATAGATTGTCCGTCGCAATAGCGGCGGATTTTCTTTT15.555555555555555No Hit
GATCCTACTATGTACCAGATGCTTGGGACACATTGGGACATAAAACAAAA15.555555555555555No Hit
CCAGTCCAAAACTAAAATAGCAAAACAAAGAATTAGAGCTAATAAGGCAA15.555555555555555No Hit
CCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGCAATTTTCA15.555555555555555No Hit
GCTTGCGAAAGTAGAGACCGCTGAACACAGGCACGCAGCGCTCGGGAAAC15.555555555555555No Hit
CTTCCCTTCCCCCGCTCCAAAAAGGATGCATTACATCCCACAGAGCACAC15.555555555555555No Hit
ACATATGAATCTTTGTTGATTACCTGGGTTAAAAAAAATGCCCCACCTTG15.555555555555555No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTACCAAAAAAAAAAAAAAA15.555555555555555No Hit
GGACTAATTCAGCTCTCAGCATAACTAGGGTGGTCCCGGCTTATGGTTCT15.555555555555555No Hit
GGGTCTTGCTCTGTCACCCAGGCTGGAGTGTGGTGGTGTGATCACTGCAC15.555555555555555No Hit
GCTCCTGTATTTTTGCTCTCTTATGTACATCTTTTGGTAGGACAAAAAGA15.555555555555555No Hit
CTTCAACCTCAGCGAACGCCAGGCCGAGGACATCCTTGAAATCCGGCTGC15.555555555555555No Hit
GTCAATTAGCCCTGATGGTTTGAAAAAATAATGAAGGAGAATGAGGGTTG15.555555555555555No Hit
CATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATT15.555555555555555No Hit
ACCCCAAGATTCTTGGCCTCTAGAGAACGAGGGGGCCAGTTAATTAAAGG15.555555555555555No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)