FastQCFastQC Report
Fri 10 May 2024
EGAF00003650901

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650901
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7
Total Bases1 kbp
Sequences flagged as poor quality0
Sequence length146
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTTAGAGGCGTTCAGTCATAATCCCACAGATGGTAGCTTCGCCCCATTG114.285714285714285No Hit
ACCTTGGCCAGGCCGGAATCGCGCACCTTGAACCACTCGTAGCCGCCGAA114.285714285714285No Hit
GTAATATGTGAAAGTAAGAGTGGTACCATAAAGTTCAGTCAAGTCTAGAC114.285714285714285No Hit
CTCACCCACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACG114.285714285714285No Hit
CTATAGGCCACAATGGGCTCTGAAACGTCTTTTTGTAGATTCTACACAAA114.285714285714285No Hit
GTGGTGAAGGGAAGGAAAAAGCAAGACGGCACAGTAACTAGAAGCAGGGC114.285714285714285No Hit
CTCTCCCACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACG114.285714285714285No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)