FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003650904

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650904
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14
Sequences flagged as poor quality0
Sequence length146
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCGAAGAGCTGGCGCTGCGCTTTATGGATATCCGTAAACGTATCTACAAG214.285714285714285No Hit
CCTGGGCACAAACAATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTA214.285714285714285No Hit
GTCGCGTTACCGCACTGGACGCCTCGCGGCGCCCATCTCCGCCACTCCGG17.142857142857142No Hit
CTCCCACCAAGAGTGTAAAAGTATTCCTATTTCACCATATCCTCTCCAGA17.142857142857142No Hit
GTAGAGATGGGTTTCACCATGTTGGCCAGGCTAGTCTGAAACTCCTGACC17.142857142857142No Hit
CCTTTGAGAAATCTGCAGATAAAGGAGTCATTCATTAGGTTAAACAAGAT17.142857142857142No Hit
GTCTCAAACTCCTGACCTCAAGTGATCCACCTGCCTTGGACTCCCAAAGT17.142857142857142No Hit
GCTAGAGCGCTGAGACCAAGGGCTAAAGCTGGGAGACTGAAACAATGCAG17.142857142857142No Hit
TTATTTAGCTCATTTGGTGAGGTCATATTTTCCTGAGTGGTCTCGAGCTT17.142857142857142No Hit
GATTCTAGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGC17.142857142857142No Hit
ACCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGATGTGAACCACTGTG17.142857142857142No Hit
CTCCCACCAACAGTGTAAAAGTATTCCTATTTCTCCATATCCTCTCCAGC17.142857142857142No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)