FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003650906

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650906
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length146
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGATTATTAAACCATTTCTAATTTCATATAGTTGTCCCATTTATACCTC211.11111111111111No Hit
TTACAGGCATGTGCCACCACACCTAGCTAATTTTTGTAGTTTTAGTAGAG211.11111111111111No Hit
AGATTGCATTGAATTTGTAGATCAATTTGATAAATATTGCCTCTTAACAA211.11111111111111No Hit
AAGGCCAGCACCAGCACCAGCTCATTCTCTTCTCACTTAAAAAACAAAAC211.11111111111111No Hit
GCTTACAGACCCATTTCTTAACCATTTTGCTGTTTCTGACAAGTTATGCT15.555555555555555No Hit
ACCTGCCAGAAGAGCAGACCGCCTTGATGGCCGCGACCCAGCGTCCCTTC15.555555555555555No Hit
CCTTCAAGATGGGAGCAAGGATTAGGTAATCTTGGGAGGAGGAAGAAGCA15.555555555555555No Hit
ATGTTACGTTGTGGAGGCTCTAGGTTCAGTTACATTCCTCTGAGAAGGTT15.555555555555555No Hit
GGATCTGAAATTGTGGCAATAATCAATAGCTTACCAACCAAAAGAGTCCA15.555555555555555No Hit
CGCATCATTCGCGAATCCGCGGATACAAAGCTGATCCGCCACTGCTCGGC15.555555555555555No Hit
TCGAAGAGCTGGCGCTGCGCTTTATGGATATCCGTAAACGTATCTACAAG15.555555555555555No Hit
ACTTAGACTGATCAAATCCCAGAGCGCCGACGTCGCGGCTGGTGCCAAGC15.555555555555555No Hit
GACTCCTCCCTAACCCATATTTTGAGGCCAGCATCATCCTGATACCAAGC15.555555555555555No Hit
CAAGAGGAATGTTCAACTCTGTGCGTTGAATGCAAATATCACAAATAAGT15.555555555555555No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)