FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003650920

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650920
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length146
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGTCGTCGCGTCGACCTCGTAGGCGTGCACGAAGCCCTGCCGGTCGCTG28.695652173913043No Hit
CCAGAAGAGCTCGTCGTCGCTCAGCGTCCCCTCCCCCTGTCTCTTATACA28.695652173913043No Hit
CCTTTCATCTATAAGTCATCCCACCAACTCTGCCAGCACCACTGGAATAA28.695652173913043No Hit
CTTGGGGTCGTCAGTGTTGTCGGCACGGTGGATCGTCGCCATGACGTACT28.695652173913043No Hit
GGGATGAGCGGCCTTCTATTCCCTCTGATGAACAGAGAGGAAAGGGAATC14.3478260869565215No Hit
CTCCCCGGGGTCCGCATAGGCGCGGTCGAGGAGATCGAGGTGGCGGTGCC14.3478260869565215No Hit
CTGTCACCCAGGCTGGAGTACAGTGGTTCGATGATAGCTCACTGCAACCT14.3478260869565215No Hit
GGAATGCTCAAGGTCCTTCTTGGCCTTCTTGGCAGCCGCCTTTGTCTCGG14.3478260869565215No Hit
TCGCCATCCAGAGAAACCAGCGCCGAACGCAGCGTGTCAGAGTAGCGGCC14.3478260869565215No Hit
GCTATACTCGACCGCGAATGAGGTACGCAAACCACGAGCCCAGCCGCCGC14.3478260869565215No Hit
GAGCAGATCGGCTCGGGAACGCACGAGCGCGAGGTCGAACGCGGTGGCTG14.3478260869565215No Hit
GGATTTGTCGGCAGTCATCCGATACTGACCCGCTTCCATGGGCCCGGCAG14.3478260869565215No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTGCGTTTATAACACTTCTTC14.3478260869565215No Hit
CGATCAGGCGGGGCACCCGGCGCTCCTTCTGGTCGATACGATCTCATCGC14.3478260869565215No Hit
GCACTGCTTAGGTTGGTTCAAATCCCAGCTCTGCCACTAGCCATTGCTTC14.3478260869565215No Hit
CGCTAGGGGCAGTGACGCGCAGCAATCCTCGAGCACCACTGGCAGGCCTC14.3478260869565215No Hit
CGGTCTCCACGGTGAGGCTTCTCTTGCGCAGGGCGATCAGTGACATGGTG14.3478260869565215No Hit
CCTTCTTGACAGTAAGACATAGATGGAATTGTCCCTATCATACAAGATTA14.3478260869565215No Hit
CCCACCTCCAGGAGCTCCTGGCCGAGCAGATCGAGGTCCTGGGTGCCGGC14.3478260869565215No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)