FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003650923

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650923
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length146
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGTTCGTTCTCGGATTTGGCGAAGGCGGTCAGGTCTGCGACATCACCAA313.636363636363635No Hit
ATAATAAAGTGTCTCCAGACATTGCCAAATAGCCCTGAGAGAAAATTGTC29.090909090909092No Hit
TAGTTTATGTTTTCTAGTTGTAAGTTAACCTTCCTAATATGTTTGAAGAC29.090909090909092No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA29.090909090909092No Hit
GGTCAAATCCCACCCTCAGGAGGCAAGCTTTCTCAAGGAGGCCCCAGATG14.545454545454546No Hit
TAGTTTATGTTTTCTAGTTGTAATTTAACCTTCCTAATATGTTTGTAGAC14.545454545454546No Hit
CATGCACCACCATGCTCGGTGATTCTCCCACCTCGGCCTCCCTAGTAGCT14.545454545454546No Hit
AAGTCTCACTCTGTTCCCCAGGCTGGAGTACAGTGGTGTGATCTCGGCTC14.545454545454546No Hit
GGCCGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGA14.545454545454546No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT14.545454545454546No Hit
CCGATGGACAGGGCGTCGTCGCGGTCGGTCTTGCGGCCGTGGCCCGTCGA14.545454545454546No Hit
GTTACCATGAGTTTGCTGTAGTGGGAAAAAAGAAAGATAGATGCCTGGGG14.545454545454546No Hit
GTAGGAGAGAAAATATTTTTTAAATTGGAGGACAAGTCCAGGGGGTCCAA14.545454545454546No Hit
CGTTTATTGTAAGCCGTCAGCATCGGGATATCATCTGCTTCAAGCTCCTC14.545454545454546No Hit
ATCTTGAACTACTTACCTCAGGTGATCCACCCACCTCGGCCTCCCAAAGT14.545454545454546No Hit
GCCTGTTCGAACAGGCCTGATTCGCGGCGCTCGGCGCCGTCGAACGCACC14.545454545454546No Hit
GCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCATGGCACCCA14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)