FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003650924

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650924
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length146
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAGACCTCCTCGGTGACGAAGGGCAGGAACGGGGCAAATAGCCGGAGCA313.636363636363635No Hit
TATATATATATTTTTAGTAGAGACAGAGTTTCGCCACGTTGGCCAGGCTG313.636363636363635No Hit
GTCTTCAGAAGGGCCCTGTCATGATACCAGTTTCCCATGGTGTTTGTTCT29.090909090909092No Hit
CTTTAAATCCTTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCA29.090909090909092No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA14.545454545454546No Hit
GGGCTGGGTGCAGTGGCTGATGCCTGTAATTCTAGCACTTTGGGAGGCTG14.545454545454546No Hit
GTTGATCATTCTATGACTACGAGATTGCATTTTGTCTTTCCAGAAAAACT14.545454545454546No Hit
CCGCGCGCACACTGCACGACCTGAGCCGGCGCCGCAAGGGGCCGTTCGTG14.545454545454546No Hit
CTCTTAACTTTGTAGAATTTTCTTTGTTCCCGTAGGGTGACCTGTCATGC14.545454545454546No Hit
GGGACTACAGGCATGTGCCACCACGCCCGGCTAATTTTTTTCTATTTTTA14.545454545454546No Hit
CAGGATAGAATGCAGTGGCATGACCTCAGCTCACTACAGCCTTGACCTCC14.545454545454546No Hit
GCACTTTGGGAGGCCAAGGCGGGTGGCCTGAGGTCAGTAGTTCCAGACCA14.545454545454546No Hit
GGGCAGGCCGATCGGTGGCGCAGCGCCTGGTCGCCGACCACGAACGAGTC14.545454545454546No Hit
GCTCAACATCACTAATGATCAGGGAAATGCAAATCAAAACACAATGTGGT14.545454545454546No Hit
GCATTTAATTGATTCTTCAAATGAGGATTATGCGGGACATGAAAAAACAG14.545454545454546No Hit
GTAATCCCAGCACTTTGTGAGGCCGAGGCGGGAAGATTGCTTGAACTCAG14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)