FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003650934

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650934
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37
Sequences flagged as poor quality0
Sequence length146
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGATAGGTAATGTCATGCGAGTCACATGTCCACTGGACAGGTGGCCCTT410.81081081081081No Hit
GGGGCTGATGGTTTTAGTCAACCAATGATCTGCCAACCGGACAAAGCAGG38.108108108108109No Hit
GGTCAACGGTGTGCAGCCAGCGCAGGATCTCGGTGTCGGACATGCCGCCG38.108108108108109No Hit
GCTCGCCGCGCATGGGCCGCGCTTCGACCTGCTGCTGGGCCGACGCACCT25.405405405405405No Hit
GGACAGGTGCACAAGGGGCTGAGACCCCAGCAGGGCTAACTGTCCTTGTC25.405405405405405No Hit
GGGGTGGATTGCTCAGTAGCGCCGGAAGCAAAAGGGCGAGGACAAGGAAT25.405405405405405No Hit
GGGTTTCACCGTGTTAGCCAGGATGGTCTAGATCTCCTGACCTTGTGATC12.7027027027027026No Hit
GCTGGCGCACAAGGCGCCGGTGCTGCAGACGGCGCCGTCGCGCCTGTCCG12.7027027027027026No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT12.7027027027027026No Hit
CTGGCAGTCCCTGTTGCGCAGCCTCGGATCCCGCCCTTCGAATGTCCTCG12.7027027027027026No Hit
GTGCAACTACAACAGGAAGACCTTCATCGAGGTCTACCACGAGGACTACC12.7027027027027026No Hit
CGGCGCAACAGGTCGGCGCCACCCAGGGTGTACCCGGCAAGTTTTCGGGC12.7027027027027026No Hit
GCAATGACTAGGACACGAAGGTCCCCTGTAGTGTGAAACGCCCAGAACAG12.7027027027027026No Hit
GCCTCGTTCATTTTGCGAAGCGGGATATCGGGGGTATCGCGGTGGGTCAG12.7027027027027026No Hit
GAAATATCGGAATCAATGCCCAAAAGATTGCGGCAATGTGCCGAATTTGT12.7027027027027026No Hit
CCAGCAAAGCGCGGTGCCGCCGGCCGGCAGCACCAGCGTCTTCCAGAGCG12.7027027027027026No Hit
GGTATTTGTGTCACTCAGGGCGTCGTCGATACTGACTGACGCGCACCCGG12.7027027027027026No Hit
GATGCTCTCTCTCATCACTCTTATTCAACATAGTGTTGGAAGTTCTGGCC12.7027027027027026No Hit
GTCTAGCGGTCTATGTATTTTATTAATGTTTTCAAAAAACCAGCTCATAT12.7027027027027026No Hit
CGGCGCCGCTCTCGCAAGCAGCGGCGTGGAACCCGCCCGGATAGTACATG12.7027027027027026No Hit
CATCAGATGGAAGTCATCATAGGTAAATGATGCAAAGGTAAAAGGTGCCA12.7027027027027026No Hit
CTGTTAGTTGATTAGATGCATCATAAACAAGTTCCTGAGATAGCTTCTAT12.7027027027027026No Hit
GCCGATATGAAGGCGGATCAGTTGGCCGTCTTCATCCCATTTGGTCGCGG12.7027027027027026No Hit
GGATAGAGAATCAAAGCAGTCAGCCTAGTCAGTATTGGCTTGGAGCCAGG12.7027027027027026No Hit
GAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAAACGGCGGGAGTA12.7027027027027026No Hit
TATCAGGTTTGAGGAAAGCTTTGTTTTTCATTGCTTTGTTCTTCATTGCT12.7027027027027026No Hit
CATCGAGCGCGGCAAGACGCCTTTGCAGGCCGCGCTGGCGGGCAGCCGCG12.7027027027027026No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)