FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003650939

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650939
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15
Sequences flagged as poor quality0
Sequence length146
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCGTGGCGCGTGATCGAGTTCCGCCACCAGAACCGGGAGGCTCTGGCAT320.0No Hit
GTTACAGATCGTGCAGTGCCTGTGGCCATTTTCAATGCTGACCCTGATGT213.333333333333334No Hit
ATATCGAATATCAAACCGTTACGCACAATCGCTTCTTTTTCATCCCGGGT213.333333333333334No Hit
AACGCAGAGTTAAGCTTGTTAATAGCCCTGGAAATGGTGAGGTCTCAAAA16.666666666666667No Hit
ATCCGTACGAATTCCATTCGAGTTACATTACTTCGTCCGTAGCCATGACA16.666666666666667No Hit
GGGCATAGTGGTGTGCACCTGTAGTCCCAGGTACTTGGGAGGCTGAGGTG16.666666666666667No Hit
GCCACTTCCGAAGAGCCGCAGGCGCTGAGCGCGAGCGCGCTGGCGGCGAC16.666666666666667No Hit
TTGGAATTATTAGGCCCAGATTTTTTTTTTTTAATTTTTGAGGTGGGGTC16.666666666666667No Hit
CTGTTGAAGTGGTTGCGGAGCCTGAAGCAGAAGCAACATTGGATACAGGC16.666666666666667No Hit
GGTTTAAACTAAAGGAAGGTAATAATACTCAAGAAAAACATAACCTGGGC16.666666666666667No Hit
CTCGCACACGTAGCGCGCGCTGCCGTTGATGGAAGTGACGATGCCCAGCG16.666666666666667No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)