FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003650940

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650940
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15
Sequences flagged as poor quality0
Sequence length146
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACTCGCCCGGCAGCACGCCCACCTGACGCGCCAGCGTCTCGTCGAAGC320.0No Hit
CACGTGAAGTGGGCGGATGTAGCAATGGCGACAGTGTTGCTGCTTTCTCT213.333333333333334No Hit
TCGCGGCACAGGATTCGGCACTTTTTGCATGGCCGCGGGAATTGTGATGA213.333333333333334No Hit
CTCTAGGCAGGGCGAGGGCAGGAGGGGCGCCACGGCTTCGTGGTTCGGAG16.666666666666667No Hit
GTCTGAACATTAAGGATGACTCCCATTTTCTGTCTGTTAATTTGGGTCTG16.666666666666667No Hit
GCCTCCCGAGTAGCTGGGTGCATGCCACCATGCCTAGCTAATTTTTATAT16.666666666666667No Hit
CTCCACCACAATCTGCAGCCCTCACCCCACATGGGGCCAAGACAGCATCC16.666666666666667No Hit
CTACAAGGCCACCTTCCTGGGCTCGGGCGCGCTCGTCGGCGGCTTCCAGC16.666666666666667No Hit
GATGTTTGTCGGGAGCATTCCGCTGGAGTACCTGTGACATATCGCAACCA16.666666666666667No Hit
CCTGTATCCAATGTTGCTTCTGCTTCAGGCTCCGCAACCACTTCAACAGC16.666666666666667No Hit
GTCTGGCTGGGTGTGGTGGCTCATGCCTGTAATCCCAGCGTTTTGGGAGG16.666666666666667No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)