FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003650942

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650942
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37
Sequences flagged as poor quality0
Sequence length146
%GC59

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCACCGGACCGGTCCAGCTGGTCGACTAGCTTAAGGCGACGCGTCTAGAA513.513513513513514No Hit
CCCGTGAAATAGGCGACCATGCCGAGCAGGACGATGGCGCCCGGCGGATA410.81081081081081No Hit
GCCAGATGTTGCTGCCGGCTTCGGCGCGTGCCACGTAGGCTGCGCCGACA38.108108108108109No Hit
GCTATGCGCGCACTGACTTACCACGGCAGCAAGGATGTACGGGTCGATAC25.405405405405405No Hit
CAGAAACTGAATATTAAAAGAAAATCTTCAACCTAAAAACAAAAACAAAA25.405405405405405No Hit
CTCCCCGGGGCCGTTCACCGGGCACCCCATCACCGCCACGGTGATGGGCT25.405405405405405No Hit
CTCCACCACAATCTGCAGCCCTCACCCCACATGGGGCCAAGACAGCATCC12.7027027027027026No Hit
ATACAAGGAAATGGCGAAGGGCCCGGGCACGGCGGAAGAGCTGGCCCGGC12.7027027027027026No Hit
CTTACTGGCAAAATGGTGCTAAGTGAGGCCATTACTCAGGTACTGGCCAC12.7027027027027026No Hit
CTCAAGTGCCAAGGATGACGGCCGAGAGGAAGCGGAGTGCGACCGAGAGG12.7027027027027026No Hit
GGCAAAGCCCCACCCCAGGACCCCAGGAGCAGAAAGAGCCTCAGCGGGGT12.7027027027027026No Hit
CGATATAATGGATGATCAGGTTTAGCAAAGGCAATGCGTTGTAACTGATA12.7027027027027026No Hit
GGTCTGGCATTTTTAAACTGTGCATTAAAATACAGAAAAGTGGTTTTTTT12.7027027027027026No Hit
TTACAAAGTTGTTGATTAACTAAGACAGCATCTGCAAGAATCCAATCTTT12.7027027027027026No Hit
CAGGTCTTCCCTGCAGCTCTGTAAGACCCTAGAGCCCCACAGACCCCACT12.7027027027027026No Hit
GTCTGCCCCGGGGGCAGGGGTGGATGCGGTGCCATCTGGCGTGCAGTCAC12.7027027027027026No Hit
GACAGGGTTTCACCATGTTTCCCAGGCTGGTCTTGAACTCAAGCTCAAGC12.7027027027027026No Hit
CCTCGCAACCTCCGCTTCCCCCGTCAACCCCATCAGAAGCTCTGAGCTGC12.7027027027027026No Hit
TCCAGGGATAGCAGCAAGAGATCATCAAATCTTGGCATTTTTCCTAGAAT12.7027027027027026No Hit
CATGATGTCGGGGCGCACGCCCCAGCCGCGGCTGCCGAACATGCTGCCGC12.7027027027027026No Hit
CCCACAGCACGACCGCGGCGACGGCCACGACCTGGCTGTCGACGTAGGCG12.7027027027027026No Hit
GTCGGCCAGCAGGTCCTCCAGCAGCTGGGTCAGCAGCTCGGCCTGCCGCA12.7027027027027026No Hit
AGATTCTTCTCCTCAGCCTCCCGAGTAGCTGGGATTACAGGGTGCGCCAC12.7027027027027026No Hit
ACTTAATGGTGAGAGACTGAATACTGTCTCCTGAAGATCAGGAACAAGAC12.7027027027027026No Hit
GTACAAGGAAATGGCGAAGGGCCCGGGCACGGCGGAAGAGCTGGCCCGGC12.7027027027027026No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)