FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003650953

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650953
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33
Sequences flagged as poor quality0
Sequence length146
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCTTGCAGCTTGTCAATGGTGGCCAGATGCTCAGCCATCCGCGCCTTG26.0606060606060606No Hit
GTGCCAGCCACTAATGTAATGGAAGTTTCCCAGTTCCTGCCTGTAACTTG26.0606060606060606No Hit
CTATGGAGCGAATGGGTCGCGGTGTGACCGCACTTTGCGGTGCACCCAGC26.0606060606060606No Hit
GAAATACCCCTACCTGCGGGCGAAGTACCACGTGGACGGTTGCCATAGCT26.0606060606060606No Hit
CCCTAAGTAAGCTCACTGGACGACCGACGATGCTCTTCCGTCTGCCGTAT26.0606060606060606No Hit
TCTTCACAACCAGCGATACAACGTACAGGCCAATTCGTCTCAAACGGCAT26.0606060606060606No Hit
GGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGC13.0303030303030303No Hit
CAAGACATTATTGAGAGAAATGTACCACTAGAAAGGTATTACATGTGTAT13.0303030303030303No Hit
GTACTTAGCTGCTCCGCGTGGATACTGCGCAGGCGTTGATCGTGCGGTGG13.0303030303030303No Hit
GTATAATCTCACTTACATGTGGAATCTTAAAAGTTCAAATTCATAGAAGC13.0303030303030303No Hit
GTCATCATCAAATGGAATCTAATGGAATCATCTAATGGACCTGAAAGGAA13.0303030303030303No Hit
GCACCATGCTGGATGCTCCACAGACCGCCATTGTTGAGACCCCGGATCTA13.0303030303030303No Hit
AGAAATTCGGCAACATGGAATAGGTCGCCGATAGACCACCCAATCTCCCC13.0303030303030303No Hit
CAAGGCGATCTATCATTTGTCACCCCCGACCCGACCAGCGTGGCAACTGG13.0303030303030303No Hit
GGTTTGAGAGTGCTGCACCCCGATACCAGGGTGCAGGCCAGTAAGACACT13.0303030303030303No Hit
CTGTTGGTACGGTTGTGCAGGCGCTTTTGCGTAATCCTCTGGCCAACCCG13.0303030303030303No Hit
TTGGTGTATGCCGCCTACTCGTCCTCGTCGTCGAGCCTGGCGAGGAAGGT13.0303030303030303No Hit
GTCACATAGCGCGCCCCATCCGAGGCGAGATACGCCACTGCCTCACCGAT13.0303030303030303No Hit
CCATTCCCATGCACTCGCGTTGATTCCATTCCATTCCATTCCATTCCATT13.0303030303030303No Hit
CAGGCACATCGTCGCTGACGGCTACGTGCGCGGCATGCAGGAGATCTGAA13.0303030303030303No Hit
CAACGACACTGCCCTGACAGTGGCCATTGTTATCGGTGTCGTCGCGCTGC13.0303030303030303No Hit
CCTTAAAGTCGACGACCTGCACGTGGAGTTCCGCACCCGTGACGGGGTAG13.0303030303030303No Hit
GTTTAATTAAAACAAAGCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGA13.0303030303030303No Hit
GCTCACTGCAACCTCAACCTCCCTGCCTCAAGCAATTCTCCTGCCTCAAG13.0303030303030303No Hit
CTGCAGGGACTCGGCGCAGGCAATCTCGGTGATGCGACGAAAATCGTCAT13.0303030303030303No Hit
ACGCTGACGCCCAACAATACGTGACATCTGTGGCCCCGGCTGACAGCCCC13.0303030303030303No Hit
CGCCAGCCGCGTAAATAAGGGTGATAGTCAAGGATTTCCGCAGGCTTCCT13.0303030303030303No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)