FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003650961

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650961
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27
Sequences flagged as poor quality0
Sequence length146
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATCGCAGGCTGACGCAAGTAGCCTTCCGCCGCGTGCGCTTGCCTGGGC311.11111111111111No Hit
CCACAGAGGCAATGCCGCATACACCGGCATCGACCCCTACTTCGACGACC311.11111111111111No Hit
AGCTCAGGGAGGACAGAAACCTCCCGTGGAGCAGAAGGGCAAAAGCTCGC311.11111111111111No Hit
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC27.4074074074074066No Hit
AGGACTGCCACCTCATTTCTGGATCGACGACCAGGCCGGCGACATTGCCG27.4074074074074066No Hit
GAAACTAAAAATTCTAAAAATCAGAGCACCTCTCCTCCTCCAAAGGAATG27.4074074074074066No Hit
AGGATGTGCAGTTCCTTGAGCAGTTCGACCGACTGGCCGGGGCGCAGCAC13.7037037037037033No Hit
GTAAGAGATGAGATAACAAAGGAGCGAGAGAAATCTCATGTGAATTTCCA13.7037037037037033No Hit
GAGCACCGTCGTGCGCCAGGGCGACACGCTCGCGCGCACCGGCAAGATGG13.7037037037037033No Hit
TCGCCGTGCCTACCATGGTGACCACGGGTGACGGGGAATCAGGGTTCGAT13.7037037037037033No Hit
GCACGATGGTGTCGAGGATTCTGGGATTCGTCCGCACATACTTGCTCACC13.7037037037037033No Hit
CCTTTCAGCGAAGCAACCCGACAAGCTCGGTCACGATGAGGTCATGGCTC13.7037037037037033No Hit
GCACAGTCTTGGCTCACTGCAACCTCCACCATTTCCCAGATTCAAGCAAT13.7037037037037033No Hit
ATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCA13.7037037037037033No Hit
GTGTTTGGATGAAGACTGAGGCAGTGCCTACCTCCCTCCACATCTGAGGA13.7037037037037033No Hit
ATAATGGGCAGTGTTTCCGGGTTAGATTCGCTTGCTTTTGTTTTTTTCAC13.7037037037037033No Hit
GACTACAGAAGTGGGACTGAAAGGGCCCACTGTTCCTTACTATGAGAAAA13.7037037037037033No Hit
ACAGTATACCTGCCAAAGTGATAGAAAGTACAAGCCTTCCTGTTTTTTAT13.7037037037037033No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)