FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003650962

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003650962
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27
Sequences flagged as poor quality0
Sequence length146
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCGAATGCATGCGTGCCGGCGAAGGCCAATTTCCGTCGGTCCGGCTCTG311.11111111111111No Hit
CCACCGGGGGCCTCGACCACGCCGTCGACCATCATTCGGTTGATCAACAG311.11111111111111No Hit
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAA311.11111111111111No Hit
CTTTCAGGTACACCAATCAGATGTAGATTTGGTCTTTTCACATAGTCCCA27.4074074074074066No Hit
TATTGAGGCTGCTTCGTGTCGGCACGAAGTGTCTTCCGATGCAGTGTCCA27.4074074074074066No Hit
GGTTCAGGATTACCTTGACGCCGTTGCTGCGCATGGTCCCAAAGAGACCG27.4074074074074066No Hit
GCTCAAATCTTCATTTATCTCTGGCCTTAACCCTGGCTCCTGAGGCTGCG13.7037037037037033No Hit
GTTTATTGTAGTTTCATGTAAATTTTGGAATTGTATTTTCTATTACCTTA13.7037037037037033No Hit
CGCGTAGAGACCGTAGAAGAAGATCTGCGGCATGCATATAAACCCGAAGA13.7037037037037033No Hit
CCATTCGGTCCAGCGGCCACCGGGGTAGGTGTACTGCAGCCGGCCGATCA13.7037037037037033No Hit
ATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGC13.7037037037037033No Hit
AGATTCCCACTGTCCCTACCTACTATCCAGCGAAACCACAGCCAAGGGAA13.7037037037037033No Hit
GACACTATCTGCTTACTGGTGGAAGGAATCGAATAGCTGATCCCTGTGGA13.7037037037037033No Hit
CCTGAAAAGTTTACAGAACCTTGCTTCTTTACTTTAATCTCAAACTTGGC13.7037037037037033No Hit
AAGACGTACTGAGTATCGAGCGGCGGTCTTGACTGGATCAGCGATATCGA13.7037037037037033No Hit
CTTCCATCCGCAGTTCCAGTTCGCCGGCACCGAAGCCGACGACATCGGCA13.7037037037037033No Hit
GACTAGACATTCCCACTGAAAATTCTTTGTGGTCCCTGAATTTGATTTTC13.7037037037037033No Hit
GTTGTCATCTTGGGGGAATCTACTCTGTTTCTTAAGTCTCCATTTGTCCT13.7037037037037033No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)